Results 11 to 20 of about 23,355 (85)

Evaluation of the rbcL marker for metabarcoding of marine diatoms and inference of population structure of selected genera

open access: yesFrontiers in Microbiology, 2023
Diatoms are one of the most important phytoplankton groups in the world’s oceans. There are responsible for up to 40% of the photosynthetic activity in the Ocean, and they play an important role in the silicon and carbon cycles by decoupling carbon from ...
Timotej Turk Dermastia   +4 more
semanticscholar   +1 more source

Comparison of matK and rbcL DNA barcodes for genetic classification of jewel orchid accessions in Vietnam

open access: yesJournal of Genetic Engineering and Biotechnology, 2021
Jewel orchid is the common name of several orchid species which can be alike in morphological characteristics, but variable in medicinal properties. At present, two DNA barcode loci, namely, maturase K (matK) and ribulose 1,5-biphosphate carboxylase ...
V. Ho   +3 more
semanticscholar   +1 more source

Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics

open access: yesISME Communications, 2021
Sedimentary ancient DNA (sedaDNA) analyses are increasingly used to reconstruct marine ecosystems. The majority of marine sedaDNA studies use a metabarcoding approach (extraction and analysis of specific DNA fragments of a defined length), targeting ...
L. Armbrecht   +10 more
semanticscholar   +1 more source

Diversity and Spatial Distribution of Chromophytic Phytoplankton in the Bay of Bengal Revealed by RuBisCO Genes (rbcL)

open access: yesFrontiers in Microbiology, 2019
Phytoplankton are the basis of primary production and play important roles in regulating energy export in marine ecosystems. Compared to other regions, chromophytic phytoplankton are considerably understudied in the Bay of Bengal (BOB).
Laxman Pujari   +9 more
semanticscholar   +1 more source

An rbcL reference library to aid in the identification of plant species mixtures by DNA metabarcoding1

open access: yesApplications in Plant Sciences, 2017
Premise of the study: DNA metabarcoding has broad-ranging applications in ecology, aerobiology, biosecurity, and forensics. A bioinformatics pipeline has recently been published for identification using a comprehensive database of ITS2, one of the common
K. Bell, Virginia M. Loeffler, B. Brosi
semanticscholar   +1 more source

trnL outperforms rbcL as a DNA metabarcoding marker when compared with the observed plant component of the diet of wild white-faced capuchins (Cebus capucinus, Primates)

open access: yesPLoS ONE, 2018
DNA metabarcoding is a powerful tool for assessing the diets of wild animals, but there is no clear consensus on which proposed plant barcoding marker is most suitable for dietary analysis.
Elizabeth K. Mallott   +2 more
semanticscholar   +1 more source

Amplification and Analysis of Rbcl Gene (Ribulose-1,5-Bisphosphate Carboxylase) of Clove in Ternate Island

open access: yesIOP Conference Series: Earth and Environment, 2019
DNA Barcoding is recommended as a tool for identifying and confirming species within the taxonomy framework. The rbcL gene is the barcode DNA for plant species. Ternate Island is one of clove plantation center in North Maluku.
Nurhasanah, Sundari, N. Papuangan
semanticscholar   +1 more source

Exceptionally high rates of positive selection on the rbcL gene in the genus Ilex (Aquifoliaceae)

open access: yesBMC Evolutionary Biology, 2019
The genus Ilex (Aquifoliaceae) has a near-cosmopolitan distribution in mesic habitats from tropical to temperate lowlands and in alpine forests. It has a high rate of hybridization and plastid capture, and comprises four geographically structured plastid
X. Yao   +5 more
semanticscholar   +1 more source

Discriminatory power of rbcL barcode locus for authentication of some of United Arab Emirates (UAE) native plants

open access: yes3 Biotech, 2017
DNA barcoding of United Arab Emirates (UAE) native plants is of high practical and scientific value as the plants adapt to very harsh environmental conditions that challenge their identification.
Lina Maloukh   +5 more
semanticscholar   +1 more source

Isolation of high lipids content microalgae from Wonorejo rivers, Surabaya, Indonesia and its identification using rbcL marker gene

open access: yesBiodiversitas Journal of Biological Diversity, 2019
. Saputro TB, Purwani KI, Ermavitalini D, Saifullah AF. 2019. Isolation of high lipids content microalgae from Wonorejo river, Surabaya, Indonesia and its identification using rbcL marker gene. Biodiversitas 20: 1380-1388.
T. B. Saputro   +3 more
semanticscholar   +1 more source

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