Results 101 to 110 of about 2,132 (180)

Consensus Bayesian phylogeny of Cyclophorus spp. including results of Automatic Barcode Gap Discovery (ABGD) and the Bayesian implementation of the Poisson tree processes model (bPTP).

, 2019
The phylogeny is based on sequence data from the COI, 16S and 28S genes. Bayesian posterior probabilities are provided at the respective nodes. The scale bar indicates the number of substitutions per site according to the applied model of sequence ...
Takahiro Hirano (150044), Fred Naggs (627405), Katharina C. M. von Oheimb (7534718), Parm Viktor von Oheimb (7534721), Tu Van Do (7534724), Jonathan Ablett (7534727), Sang Van Pham (7534733), Hao Van Luong (7534730)   +7 more
core   +1 more source

4.Lobiger_COI_ distance_matrix

, 2018
Matrix of pairwise TrN-corrected COI distances for all Lobiger haplotypes, used as input for ABGD ...
Nerida G. Wilson (489968), Awbrey, Jaymes D., Wilson, Nerida G., Ellingson, Ryan A., Angel A. Valdes (5027222), Herbert, David G., Krug, Patrick J., Trowbridge, Cynthia D., David G. Herbert (5027234), Ryan A. Ellingson (3146595), Andres Aguilar (3201624), Valdes, Angel A., Yayoi M. Hirano (3362957), Cynthia D. Trowbridge (3362954), Jaymes D. Awbrey (5027225), Rico, Diane M., Patrick J. Krug (3324354), John S. Berriman (5027231), Berriman, John S., Diane M. Rico (5027228), Aguilar, Andres, Hirano, Yayoi M.   +21 more
core   +1 more source

MOESM2 of Hidden biodiversity revealed by integrated morphology and genetic species delimitation of spring dwelling water mite species (Acari, Parasitengona: Hydrachnidia)

, 2019
Additional file 2: Figure S1. ABGD output plots of the cox1 K2P (A&B) and p-distances (C&D)
Lucas Blattner (7527320), Reinhard Gerecke (7527323), Stefanie Fumetti (7527326)   +2 more
core   +1 more source

3.Oxynoe_COI_ distance_matrix

, 2018
Matrix of pairwise TrN-corrected COI distances for all Oxynoe haplotypes, used as input for ABGD ...
Nerida G. Wilson (489968), Awbrey, Jaymes D., Wilson, Nerida G., Ellingson, Ryan A., Angel A. Valdes (5027222), Herbert, David G., Krug, Patrick J., Trowbridge, Cynthia D., David G. Herbert (5027234), Ryan A. Ellingson (3146595), Andres Aguilar (3201624), Valdes, Angel A., Yayoi M. Hirano (3362957), Cynthia D. Trowbridge (3362954), Jaymes D. Awbrey (5027225), Rico, Diane M., Patrick J. Krug (3324354), John S. Berriman (5027231), Berriman, John S., Diane M. Rico (5027228), Aguilar, Andres, Hirano, Yayoi M.   +21 more
core   +1 more source

MOESM5 of Hidden biodiversity revealed by integrated morphology and genetic species delimitation of spring dwelling water mite species (Acari, Parasitengona: Hydrachnidia)

, 2019
Additional file 5: Figure S4. ABGD output plots of the 28S K2P (A&B) and p-distances (C&D)
Lucas Blattner (7527320), Reinhard Gerecke (7527323), Stefanie Fumetti (7527326)   +2 more
core   +1 more source

DNA barcoding and cryptic diversity in fishes from the Ili River Valley in China, Xinjiang

Ecology and Evolution
The Ili River Valley, located in the northwest of China, serves as a vital repository for fish genetic resources. Its extensive water network and diverse climate have given rise to a unique fish composition and endemic species.
Ling‐Ling Zheng, Dan Yu, Ning Sun, Cheng Wang, Wen‐Jun Chen, Zu‐Fa Ding, Shun‐Ping He, Lian‐Dong Yang   +7 more
doaj   +1 more source

Primary Species Hypothesis (PSHs) delineated with the COI-5P gene.

, 2014
Bayesian gene tree with posterior probabilities (>0.9) next to each node. Branch tips are the 29 haplotypes detected in the study. Vertical thick lines indicate PSHs delineated with ABGD and GMYC methods; numbers next to the vertical lines are PSH codes;
Jazmin Hernández-Kantún (612877), Ignacio Bárbara (612878), Cristina Pardo (612874), Rodolfo Barreiro (122532), Lua Lopez (612875), Line Le Gall (542060), Viviana Peña (612876)   +6 more
core   +1 more source

Neighbor-joining tree of COI sequence divergences (K2P) obtained from 567 specimens of sand flies analyzed.

, 2015
Numbers next to the branches indicate Bootstrap percentages ≥80%. One black dash indicates groups partitioned by ABGD using the value of 2.15%. One white dash indicates the groups partitioned by ABGD using the cut-off of 1.29%.
Israel de Souza Pinto (818742), Rafaela Vieira Bruno (109841), Adelson Luiz Ferreira (818745), Reginaldo Peçanha Brazil (293390), Bruna Dias das Chagas (818743), José Dilermando Andrade-Filho (818748), Eunice Aparecida Bianchi Galati (818749), Helder Ricas Rezende (818746), Paloma Helena Fernandes Shimabukuro (718789), Andressa Alencastre Fuzari Rodrigues (818744), Aloisio Falqueto (818747), Alexandre Afranio Peixoto (109839)   +11 more
core   +1 more source

Species Delimitation and Cryptic Diversity in Rheotanytarsus Thienemann & Bause, 1913 (Diptera: Chironomidae) Based on DNA Barcoding

Insects
The genus Rheotanytarsus Thienemann & Bause, 1913 (Diptera: Chironomidae) currently includes more than 120 recognized species worldwide, but precise species-level identification based solely on morphology remains challenging.
Yuan Yao, Jia-Yu Chen, Xiao-Ling Gong, Chen-Hong Li, Zheng Liu, Xiao-Long Lin   +5 more
doaj   +1 more source

MOESM4 of Hidden biodiversity revealed by integrated morphology and genetic species delimitation of spring dwelling water mite species (Acari, Parasitengona: Hydrachnidia)

, 2019
Additional file 4: Figure S3. Recursive partition ABGD cox1 output tree. Shows individuals grouped as putative species delimited by the ABGD method. Clades indicating more species than the a-priori morphospecies are marked in red and differences to the ...
Lucas Blattner (7527320), Reinhard Gerecke (7527323), Stefanie Fumetti (7527326)   +2 more
core   +1 more source