Results 41 to 50 of about 1,944 (179)

DNA barcoding of marine fish species in the waters surrounding Hainan Island, northern South China Sea

Frontiers in Marine Science, 2023
IntroductionHainan Island is encompassed within the shallow waters of the tropical continental shelf in China, which is recognized as a significant hotspot for fish biodiversity.
Jinxia Zhang, Jinxia Zhang, Lei Xu, Lei Xu, Feiyan Du, Feiyan Du, Quehui Tang, Quehui Tang, Lianggen Wang, Lianggen Wang, Jiajia Ning, Jiajia Ning, Delian Huang, Delian Huang, Yafang Li, Yafang Li, Shuangshuang Liu, Shuangshuang Liu, Xuehui Wang, Xuehui Wang, Xuehui Wang   +20 more
doaj   +1 more source

ABGD/Klee species proxy strategy.

, 2014
Species delimitation is shown as a function of time and robustness. ABGD/Klee allows for a fast and relatively accurate first assessment of species diversity.
Nicolas Puillandre (369446), Maria Vittoria Modica (369449), Mandë Holford (369444), Magalie Castelin (468505), Yu Zhang (12946)   +4 more
core   +1 more source

Quenching the Hubbard Model: Comparison of Nonequilibrium Green's Function Methods

Contributions to Plasma Physics, EarlyView.
ABSTRACT We benchmark nonequilibrium Green's function (NEGF) approaches for interaction quenches in the half‐filled Fermi–Hubbard model in one and two dimensions. We compare fully self‐consistent two‐time Kadanoff–Baym equations (KBE), the generalized Kadanoff–Baym ansatz (GKBA), and the recently developed NEGF‐based quantum fluctuations approach (NEGF‐
Jan‐Philip Joost, Christopher Makait, Alexander Osterkorn, Erik Schroedter   +3 more
wiley   +1 more source

MOTU recognition per morphospecies using the ABGD method.

, 2016
MOTU recognition per morphospecies using the ABGD method.
Seunghwan Lee (207004), Wonhoon Lee (245815), In Gyun Park (2157556), Haechul Park (2157550), Taeman Han (2157553)   +4 more
core   +1 more source

An (αβ)2 Architecture of the Arabidopsis thaliana tRNA Splicing Endonuclease Complex: Structural Modeling and Evolutionary Analyses

Proteins: Structure, Function, and Bioinformatics, EarlyView.
ABSTRACT The tRNA splicing endonuclease (TSEN) removes introns from precursor tRNAs (pre‐tRNAs) in eukaryotes and archaea, but the architecture and subunit organization of plant TSEN remain poorly defined. Here, we integrated in planta bimolecular fluorescence complementation (BiFC) assays with AlphaFold3 (AF3)‐based structural modeling, molecular ...
Mohammad Moniruzzaman, Markus Englert, Kazuhito Akama   +2 more
wiley   +1 more source

input file 1 for ABGD, pairwise TrN-corrected COI distances

, 2018
Matrix of pairwise TrN-corrected COI distances for all Placida and nominal Stiliger haplotypes, used as input for ABGD ...
Patrick Krug (7905875), Melanie Medina (7905881), Terrence Gosliner (4443778), Angel Valdes (7905884), Wong, Leena, Valdes, Angel, Gosliner, Terrence, Leena Wong (7905878), Medina, Melanie, Krug, Patrick   +9 more
core   +1 more source

Mainland diversification and recent island lineages in the reduviid genus Tapirocoris: an integrative taxonomic framework with four new species

Insect Science, EarlyView.
Using an integrative taxonomic framework that combines COI DNA barcodes, geometric morphometrics and phylogeography, we revise the assassin bug genus Tapirocoris and recover seven well‐supported species, including four newly described cryptic species.
Ping Zhao, Qinpeng Liu, Minmin Ou, Huaiyu Liu, Yingqi Liu, Jianyun Wang, Miao Yang, Zhuo Chen, Wanzhi Cai   +8 more
wiley   +1 more source

ABGD analysis statistics.

, 2015
The number of operational taxonomic units is reported given the alignment algorithm, the genetic distance calculation methodology and the a priori established recursive intraspecific distance partitions in ABGD as a function of the prior limit between ...
Gavin Ericson (454709), Rose E. Cobb (787694), Michael R. Hall (153405), Lone Høj (153420), Elizabeth Evans-Illidge (787696), Benjamin R. Gordon (787695), Philip Kearns (787693), Nikos Andreakis (92194)   +7 more
core   +1 more source

Filter feeders living on suspension feeders: New insights into the lifestyle and distribution of Arcturidae Dana, 1849 (Crustacea: Isopoda) around Iceland

Marine Ecology, EarlyView.
Abstract The focus of the present study was on arcturid isopods occurring in the subarctic region around Iceland. Data from two decades of sampling with an epibenthic sledge (EBS) during numerous expeditions of the BIOICE (Benthic Invertebrates of Icelandic Waters; 1992–2004) and IceAGE (Icelandic marine Animals: Genetics and Ecology; 2011—ongoing ...
Vivien Lukas Hartmann, Emanuel Pereira, Nancy F. Mercado‐Salas, Anne‐Nina Lörz, Jörundur Svavarsson, Saskia Brix   +5 more
wiley   +1 more source

Geographic distribution of the amphibians’ genetic lineages delimited by ABGD program.

, 2018
The thick black lines correspond to the suture zones of the deepest splits for each taxon. Dashed lines correspond to the geographical limits between lineages delimited by ABGD program. The ABGD lineages are represented by the coloured dots.
Boualem Dellaoui (5698145), Olivier Peyre (5698154), Philippe Geniez (795148), Raouaa Fathalla (5698139), Pierre-André Crochet (44226), Patricia Sourouille (5698142), Salah Telailia (5698151), Fatiha Koudache (5698148), Menad Beddek (5698133), Véronique Arnal (3300831), Saliha Zenboudji-Beddek (5698136)   +10 more
core   +1 more source