Results 211 to 220 of about 271,635 (292)

Ancient DNA suggests a historical demographic decline and genetic erosion in the Atlantic bluefin tuna. [PDF]

Proc Natl Acad Sci U S A
Andrews AJ, Eriksen EF, Star B, Præbel K, Di Natale A, Malca E, Onar V, Aniceti V, Carenti G, Piquès G, Nielsen SV, Persson P, Piattoni F, Fontani F, Atmore LM, Kersten O, Tinti F, Cilli E, Cariani A.   +18 more
europepmc   +1 more source

Structural Variations Contribute to Subspeciation and Yield Heterosis in Rice

Plant Biotechnology Journal, EarlyView.
ABSTRACT Yield heterosis has been extensively exploited in hybrid breeding, with intersubspecific hybrids often exhibiting the most pronounced effects. However, developing elite hybrids remains a laborious and time‐consuming process. The genetic basis of heterosis has been debated for over a century, hindered largely by the lack of high‐quality genomes.
Zhiwu Dan, Yunping Chen, Wenchao Huang
wiley   +1 more source

Improved detection of methylation in ancient DNA. [PDF]

Genome Biol
Sawyer S, Gelabert P, Yakir B, Llanos-Lizcano A, Sperduti A, Bondioli L, Cheronet O, Neugebauer-Maresch C, Teschler-Nicola M, Novak M, Pap I, Szikossy I, Hajdu T, Moiseyev V, Gromov A, Zariņa G, Meshorer E, Carmel L, Pinhasi R.   +18 more
europepmc   +1 more source

Pangenome Analysis Reveals Structural Variations Associated With Citric Acid Accumulation in Prunus mume

Plant Biotechnology Journal, EarlyView.
ABSTRACT Pangenome can reveal a large number of variations, providing a more comprehensive view of the genetic diversity of species that a single reference genome cannot surpass. Here, we assembled the haplotype telomere‐to‐telomere genome and 10 chromosome‐level genomes, integrated with two previously reported genomes, and constructed a graph ...
Xiao Huang, Ximeng Lin, Pengyu Zhou, Wei Tan, Feng Gao, Zhaojun Ni, Ting Shi, Yang Bai, Chengdong Ma, Yufan Ma, Minglu Li, Faisal Hayat, Qixiang Zhang, Ryutaro Tao, Jianmin Wan, Zhihong Gao   +15 more
wiley   +1 more source

A High-Throughput Ancient DNA Extraction Method for Large-Scale Sample Screening. [PDF]

Mol Ecol Resour
Gilardet A, Lord E, García GO, Xenikoudakis G, Douka K, Wooller MJ, Rowe T, Martin MD, Le Moullec M, Anisimov M, Heintzman PD, Dalén L.   +11 more
europepmc   +1 more source

Autoactive MtDMI1 Reprogrammes Immunity and Development in Tomato via Ethylene Signalling

Plant Biotechnology Journal, EarlyView.
ABSTRACT The Common Symbiosis Signalling Pathway (CSSP) underpins interactions between plants and microbes, yet its potential for crop improvement remains underexplored. Here, we investigated the gain‐of‐function mutant SPD1 (MtDMI1S760N), which constitutively activates the symbiotic signalling pathway in Medicago truncatula, by expressing it in tomato
Haiyue Liu, Ji Xu, Fang Xie
wiley   +1 more source

Ancient DNA from the Green Sahara reveals ancestral North African lineage. [PDF]

Nature
Salem N, van de Loosdrecht MS, Sümer AP, Vai S, Hübner A, Peter B, Bianco RA, Lari M, Modi A, Al-Faloos MFM, Turjman M, Bouzouggar A, Tafuri MA, Manzi G, Rotunno R, Prüfer K, Ringbauer H, Caramelli D, di Lernia S, Krause J.   +19 more
europepmc   +1 more source

Chromosome‐Scale Haplotype Genome Assemblies for the Australian Mango ‘Kensington Pride’ and a Wild Relative, Mangifera laurina, Provide Insights Into Anthracnose‐Resistance and Volatile Compound Biosynthesis Genes

Plant Biotechnology Journal, EarlyView.
ABSTRACT Mango (Mangifera indica) is one of the most popular fruits cultivated in tropical and subtropical regions of the world. The availability of reference genomes helps to identify the genetic basis of important traits. Here, we report assembled high‐quality chromosome‐level genomes for the Australian mango cultivar ‘Kensington Pride’ and M ...
Upendra Kumari Wijesundara, Agnelo Furtado, Ardashir Kharabian Masouleh, Natalie L. Dillon, Heather E. Smyth, Robert J. Henry   +5 more
wiley   +1 more source

Read Length Dominates Phylogenetic Placement Accuracy of Ancient DNA Reads. [PDF]

Mol Biol Evol
Bettisworth B, Psonis N, Poulakakis N, Pavlidis P, Stamatakis A.   +4 more
europepmc   +1 more source