Results 31 to 40 of about 46,324 (245)

NUMBER OF RUNS VARIATIONS ON AUTODOCK 4 DO NOT HAVE A SIGNIFICANT EFFECT ON RMSD FROM DOCKING RESULTS

open access: yesФармация и фармакология (Пятигорск), 2021
The aim. The number of runs in the docking process with AutoDock 4 is known to play an important role in the validity of the results obtained. The greater the number of runs it is often associated with the more valid docking results.
M.R.F. Pratama, S. Siswandono
doaj   +1 more source

AutoDock-SS: AutoDock for Multiconformational Ligand-Based Virtual Screening [PDF]

open access: yes
Ligand-based virtual screening (LBVS) can be pivotal for identifying potential drug leads, especially when the target protein’s structure is unknown.
Huda Kadhim Salem Khalaf (18386346)   +4 more
core   +2 more sources

Computational Optimization of Bioanalytical Parameters for the Evaluation of the Toxicity of the Phytomarker 1,4 Napthoquinone and its Metabolite 1,2,4-trihydroxynapththalene

open access: yesJournal of Pharmacopuncture, 2015
Objectives: Lawsone (1,4 naphthoquinone) is a non redox cycling compound that can be catalyzed by DT diaphorase (DTD) into 1,2,4-trihydroxynaphthalene (THN), which can generate reactive oxygen species by auto oxidation.
Velmani Gopal   +4 more
doaj   +1 more source

Hasil In Silico Senyawa Z12501572, Z00321025, SCB5631028 dan SCB13970547 dibandingkan Turunan Zerumbon terhadap Human Liver Glycogen Phosphorylase (1l5Q) sebagai Antidiabetes

open access: yesJurnal Kimia Valensi, 2016
Abstrak Human Liver Glycogen Phosphorylase (HLGP), suatu katalis glikogen yang mengontrol pelepasan glukosa-1-fosfat glikogen dari hati. Enzim ini mempunyai peran sentral dalam luaran glukosa hati sehingga menjadi target obat antidiabetik.
Fitri Kusvila Aziz   +4 more
doaj   +1 more source

In silico study of traditional Chinese medicinal compounds targeting alzheimer's disease amyloid beta-peptide (1–42)

open access: yesChemical Physics Impact, 2023
The objective of this study is to recognize the potential traditional Chinese medicinal compound by virtual screening and docking analysis for the amyloid-beta disaggregation mechanism on Alzheimer's disease management.
V. Naveen Kumar   +7 more
doaj   +1 more source

Molecular Docking - AutoDock tool

open access: yes, 2022
Docking studies will help in appropriate consideration of the protein’s active site and its interaction with the ligand. The interaction between a small molecule and a protein may result in inhibition of the protein.
Nirmaladevi Ponnusamy
core   +1 more source

A Comparative Study for the Accuracy of Three Molecular Docking Programs Using HIV-1 Protease Inhibitors as a Model

open access: yesIraqi Journal of Pharmaceutical Sciences, 2022
Flexible molecular docking is a computational method of structure-based drug design to evaluate binding interactions between receptor and ligand and identify the ligand conformation within the receptor pocket.
Twana Mohsin Salih
doaj   +1 more source

Accelerating Drug Discovery in AutoDock-GPU with Tensor Cores

open access: yes, 2023
In drug discovery, molecular docking aims at characterizing the binding of a drug-like molecule to a macromolecule. AutoDock-GPU, a state-of-the-art docking software, estimates the geometrical conformation of a docked ligand-protein complex by minimizing
Peng, Ivy,, Schieffer, Gabin,
core   +1 more source

AutoDock Docking Results between mFMO and Indole

open access: yes, 2023
AutoDock software was used to mimic the docking between flavin-containing monooxygenase cloned from Methylophaga sp. strain SK1 (mFMO) and indole. The structure of mFMO was from Protein Data Bank (PDB) numbered 2vq7.
Fan, C (via Mendeley Data)
core   +2 more sources

SouthAfricaDigitalScience/autodock-deploy: AutoDock4 for CODE-RADE

open access: yes, 2018
<p> </p> <p>Autodock Suite</p> <p>This repository contains the build and test scripts for the Autodock and Autogrid tools. This project builds autodock4, <strong>not autodock vina</strong>.
Sean Murray, Bruce Becker
core   +1 more source

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