Results 131 to 140 of about 5,396 (206)

BACT: nonparametric Bayesian cell typing for single-cell spatial transcriptomics data. [PDF]

Brief Bioinform
Yan Y, Luo X.
europepmc   +1 more source

PCA-based spatial domain identification with state-of-the-art performance. [PDF]

Bioinformatics
Schaub DP, Yousefi B, Kaiser N, Khatri R, Puelles VG, Krebs CF, Panzer U, Bonn S.   +7 more
europepmc   +1 more source

Comparing Xenium 5K and Visium HD data from identical tissue slide at a pathological perspective. [PDF]

J Exp Clin Cancer Res
Long M, Hu T, Wang W, Gao J, Wang N, Nilsson M.   +5 more
europepmc   +1 more source

SpotSweeper: spatially aware quality control for spatial transcriptomics. [PDF]

Nat Methods
Totty M, Hicks SC, Guo B.
europepmc   +1 more source

Systematic benchmarking of computational methods to identify spatially variable genes. [PDF]

Genome Biol
Li Z, M Patel Z, Song D, Yasa SN, Cannoodt R, Yan G, Li JJ, Pinello L.   +7 more
europepmc   +1 more source

Network models for bridging denoising and identifying spatial domains of spatially resolved transcriptomics. [PDF]

PLoS Comput Biol
Wang H, Zhang W, Liu Z, Ma X.
europepmc   +1 more source

Black Box Banksy [PDF]

, 2020
openaire   +1 more source

Spatial mutual nearest neighbors for spatial transcriptomics data. [PDF]

Bioinformatics
Zhou H, Panwar P, Guo B, Hallinan C, Ghazanfar S, Hicks SC.   +5 more
europepmc   +1 more source

BANKSY unifies cell typing and tissue domain segmentation for scalable spatial omics data analysis. [PDF]

Nat Genet
Singhal V, Chou N, Lee J, Yue Y, Liu J, Chock WK, Lin L, Chang YC, Teo EML, Aow J, Lee HK, Chen KH, Prabhakar S.   +12 more
europepmc   +1 more source

Spatially resolved molecular sex differences at single-cell resolution in the adult human ventromedial and arcuate hypothalamus. [PDF]

Cell Rep
Mulvey B, Wang Y, Divecha HR, Bach SV, Montgomery KD, Cinquemani S, Chandra A, Du Y, Miller RA, Kleinman JE, Page SC, Hyde TM, Martinowich K, Hicks SC, Hansen KD, Maynard KR.   +15 more
europepmc   +1 more source