Results 51 to 60 of about 113,652 (316)

Somatic mutational landscape in von Hippel–Lindau familial hemangioblastoma

open access: yesMolecular Oncology, EarlyView.
The causes of central nervous system (CNS) hemangioblastoma in Von Hippel–Lindau (vHL) disease are unclear. We used Whole Exome Sequencing (WES) on familial hemangioblastoma to investigate events that underlie tumor development. Our findings suggest that VHL loss creates a permissive environment for tumor formation, while additional alterations ...
Maja Dembic   +5 more
wiley   +1 more source

The Bayesian Block Algorithm

open access: yes, 2013
This presentation describes the Bayesian Block algorithm in the context of its application to analysis of time series data from the Fermi Gamma Ray Space Telescope. More generally this algorithm performs optimal segmentation analysis on sequential data in any mode, with arbitrary sampling and in the presence of gaps and exposure variations.
Scargle, Jeffrey D.   +3 more
openaire   +2 more sources

Deciphering transcriptional plasticity in pancreatic ductal adenocarcinoma reveals alterations in sensory neuron innervation

open access: yesMolecular Oncology, EarlyView.
Pancreatic sensory neurons innervating healthy and PDAC tissue were retrogradely labeled and profiled by single‐cell RNA sequencing. Tumor‐associated innervation showed a dominant neurofilament‐positive subtype, altered mitochondrial gene signatures, and reduced non‐peptidergic neurons.
Elena Genova   +14 more
wiley   +1 more source

Simulation of direct mapped, k-way and fully associative cache on all pairs shortest paths algorithms

open access: yesСистемный анализ и прикладная информатика, 2019
Caches are intermediate level between fast CPU and slow main memory. It aims to store copies of frequently used data and to reduce the access time to the main memory.
A. A. Prihozhy
doaj   +1 more source

Adaptor protein CIN85 potentiates the motility of osteosarcoma cells via the Akt/mTOR and MMP2‐COL3A1 axis

open access: yesMolecular Oncology, EarlyView.
CIN85 is highly expressed in osteosarcoma, particularly in metastatic lesions. Its overexpression increases cell migration and Matrigel invasion, while silencing CIN85 suppresses these behaviors. Transcriptome analysis shows that CIN85 regulates MMP2, COL3A1, and Akt/mTOR signaling. Targeting these pathways reverses CIN85‐induced motility, highlighting
Iryna Horak   +10 more
wiley   +1 more source

Competing all-pairs shortest paths algorithms for sparse / dense graphs: implementation and comparison

open access: yesСистемный анализ и прикладная информатика
In this paper we consider two families of competing algorithms for finding the shortest paths between all pairs of vertices (APSP) in directed weighted large graphs with different edge densities: Dijkstra and Floyd-Warshall. For comparison, we have taken
A. A. Prihozhy, O. N. Karasik
doaj   +1 more source

Automated FRAP microscopy for high‐throughput analysis of protein dynamics in chromatin organization and transcription

open access: yesFEBS Open Bio, EarlyView.
RoboMic is an automated confocal microscopy pipeline for high‐throughput functional imaging in living cells. Demonstrated with fluorescence recovery after photobleaching (FRAP), it integrates AI‐driven nuclear segmentation, ROI selection, bleaching, and analysis.
Selçuk Yavuz   +6 more
wiley   +1 more source

Threaded block-parallel algorithm for finding the shortest paths on graph

open access: yesДоклады Белорусского государственного университета информатики и радиоэлектроники, 2019
The problem of finding the shortest paths on weighted graphs is considered. The variants of statement of the problem, known algorithms for it solving, areas of practical application and existing challenges, in particular, the challenge of scalability ...
O. N. Karasik, A. A. Prihozhy
doaj  

Tumor‐stromal crosstalk and macrophage enrichment are associated with chemotherapy response in bladder cancer

open access: yesFEBS Open Bio, EarlyView.
Chemoresistance in bladder cancer: Macrophage recruitment associated with CXCL1, CXCL5 and CXCL8 expression is characteristic of Gemcitabine/Cisplatin (Gem/Cis) Non‐Responder tumors (right side) while Responder tumors did not show substantial tumor‐stromal crosstalk (left side). All biological icons are attributed to Bioicons: carcinoma, cancerous‐cell‐
Sophie Leypold   +11 more
wiley   +1 more source

Microglial dynamics and ferroptosis induction in human iPSC‐derived neuron–astrocyte–microglia tri‐cultures

open access: yesFEBS Open Bio, EarlyView.
A tri‐culture of iPSC‐derived neurons, astrocytes, and microglia treated with ferroptosis inducers as an Induced ferroptosis model was characterized by scRNA‐seq, cell survival, and cytokine release assays. This analysis revealed diverse microglial transcriptomic changes, indicating that the system captures key aspects of the complex cellular ...
Hongmei Lisa Li   +6 more
wiley   +1 more source

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