Results 1 to 10 of about 75 (58)

The genome sequence of Gari tellinella (Lamarck, 1818), a sunset clam. [PDF]

Wellcome Open Res, 2022
We present a genome assembly from an individual Gari tellinella (Mollusca; Bivalvia; Cardiida; Psammobiidae). The genome sequence is 1,598 megabases in span. The majority of the assembly (99.85%) is scaffolded into 19 chromosomal pseudomolecules.
Holmes A, Darbyshire T, Brennan M, McTierney S, Small A, Marine Biological Association Genome Acquisition Lab, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium.   +10 more
europepmc   +2 more sources

The genome sequence of a mollusc, <i>Azorinus chamasolen</i> (da Costa, 1778). [PDF]

Wellcome Open Res
We present a genome assembly from a specimen of the mollusc, Azorinus chamasolen (Mollusca; Bivalvia; Cardiida; Solecurtidae). The genome sequence has a total length of 1,723.50 megabases.
Fletcher C, Little C, Natural History Museum Genome Acquisition Lab, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team, Wellcome Sanger Institute Scientific Operations: Sequencing Operations, Wellcome Sanger Institute Tree of Life Core Informatics team, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium.   +9 more
europepmc   +2 more sources

The genome sequence of the Atlantic Strawberry Cockle, <i>Americardia media</i> (Linnaeus, 1758) (Cardiida: Cardiidae). [PDF]

Wellcome Open Res
We present a genome assembly from an individual Americardia media (Atlantic Strawberry Cockle; Mollusca; Bivalvia; Cardiida; Cardiidae). The assembly contains two haplotypes with total lengths of 1 299.87 megabases and 1 284.99 megabases.
Li R, Li J, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team, Wellcome Sanger Institute Scientific Operations: Sequencing Operations, Wellcome Sanger Institute Tree of Life Core Informatics team, Tree of Life Core Informatics collective, Blaxter ML.   +7 more
europepmc   +2 more sources

The genome sequence of the smooth giant clam, Tridacna derasa Röding, 1798. [PDF]

Wellcome Open Res
We present a genome assembly from an individual Tridacna derasa (the smooth giant clam; Mollusca; Bivalvia;Cardiida; Cardiidae). The genome sequence is 1,060.2 megabases in span. Most of the assembly is scaffolded into 18 chromosomal pseudomolecules. The
Li R, Li J, Lopez JV, Oatley G, Clayton-Lucey IA, Sinclair E, Aunin E, Gettle N, Santos C, Paulini M, Niu H, McKenna V, O'Brien R, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory Team, Wellcome Sanger Institute Scientific Operations: Sequencing Operations, Wellcome Sanger Institute Tree of Life Core Informatics Team, EBI Aquatic Symbiosis Genomics Data Portal Team, Aquatic Symbiosis Genomics Project Leadership.   +18 more
europepmc   +2 more sources

The genome sequence of the heart cockle, Fragum sueziense (Issel, 1869). [PDF]

Wellcome Open Res
We present a genome assembly from an individual Fragum sueziense (the heart cockle; Mollusca; Bivalvia; Cardiida; Cardiidae). The genome sequence is 1,206.1 megabases in span. Most of the assembly is scaffolded into 19 chromosomal pseudomolecules.
Li R, Li J, Lemer S, Lopez JV, Oatley G, Sinclair E, Clayton-Lucey IA, Aunin E, Gettle N, Santos C, Paulini M, Niu H, McKenna V, O'Brien R, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory Team, Wellcome Sanger Institute Scientific Operations: Sequencing Operations, Wellcome Sanger Institute Tree of Life Core Informatics Team, EBI Aquatic Symbiosis Genomics Data Portal Team, Aquatic Symbiosis Genomics Project Leadership.   +19 more
europepmc   +2 more sources

Seasonal Dynamics of the Gut Microbiome in Urban Feral Pigeons Are Associated With Environmental Conditions, Not With Diet Shifts. [PDF]

Ecol Evol
Using feral pigeons in urban environments, we show that microbiome diversity and composition vary seasonally despite stable diet composition. ABSTRACT Gut microbiomes play a crucial role in host physiology and seasonal adaptation. While seasonal shifts in avian gut microbiota are often attributed to seasonal diet variation, environmental factors may be
Zhang K, Zomer H, Potkamp G, Salles JF, Tieleman BI, Dietz MW.   +5 more
europepmc   +2 more sources

Comparative Genomics of Sex-Determination-Related Genes Reveals Shared Evolutionary Patterns Between Bivalves and Mammals, but Not Fruit Flies. [PDF]

Mol Ecol
ABSTRACT The molecular basis of sex determination (SD), while being extensively studied in model organisms, remains poorly understood in many animal groups. Bivalves, a diverse class of molluscs with a variety of reproductive modes, represent an ideal yet challenging clade for investigating SD and the evolution of sexual systems.
Nicolini F, Nuzhdin SV, Ghiselli F, Luchetti A, Milani L.   +4 more
europepmc   +2 more sources

Fauna Europaea: Mollusca - Bivalvia. [PDF]

Biodivers Data J, 2015
Fauna Europaea provides a public web-service with an index of scientific names (including important synonyms) of all living European land and freshwater animals, their geographical distribution at country level (up to the Urals, excluding the Caucasus ...
Araujo R, de Jong Y.
europepmc   +2 more sources

Capturing drifting species and molecules—Lessons learned from integrated approaches to assess marine metazoan diversity in highly dynamic waters

Environmental DNA, Volume 5, Issue 6, Page 1541-1556, November 2023., 2023
By using an integrated morphological and genetic approach, we validated eDNA and zooplankton metabarcoding as a holistic approach to reliably identify marine metazoan fauna in highly dynamic waters of the North Sea. COI metabarcoding outperformed 18S V4 metabarcoding in terms of the number of detected species.
Alica Ohnesorge, Uwe John, Sarah Taudien, Stefan Neuhaus, Lucie Kuczynski, Silke Laakmann   +5 more
wiley   +1 more source

Dietary diversity of multiple shorebird species in an Asian subtropical wetland unveiled by DNA metabarcoding

Environmental DNA, Volume 4, Issue 6, Page 1381-1396, November 2022., 2022
Despite previous studies that analyzed the foraging niches of shorebirds worldwide, the dietary niche dynamics of shorebirds coexisting in Asia are very poorly known. This study is therefore the early few that aim to unveil the trophic organization of shorebirds in a subtropical wetland within the EAAF.
Pei‐Yu Huang, Emily Shui Kei Poon, Lai Ying Chan, David Tsz Chung Chan, Stella Huynh, Ivy Wai Yan So, Yik‐Hei Sung, Simon Yung Wa Sin   +7 more
wiley   +1 more source