Results 41 to 50 of about 27,790 (285)

A fuzzy irregular cellular automata-based method for the vertex colouring problem

Connection Science, 2020
Vertex colouring is among the most important problems in graph theory which has been widely applied across different real-world problems. In vertex colouring problem (VCP), the goal is to assign a distinct colour to each vertex of the graph in such a way
Mostafa Kashani, Saeid Gorgin, Seyed Vahab Shojaedini   +2 more
doaj   +1 more source

In situ molecular organization and heterogeneity of the Legionella Dot/Icm T4SS

FEBS Letters, EarlyView.
We present a nearly complete in situ model of the Legionella Dot/Icm type IV secretion system, revealing its central secretion channel and identifying new components. Using cryo‐electron tomography with AI‐based modeling, our work highlights the structure, variability, and mechanism of this complex nanomachine, advancing understanding of bacterial ...
Przemysław Dutka, Yuxi Liu, Stefano Maggi, Debnath Ghosal, Jue Wang, Prashant P. Damke, Stephen D. Carter, Wei Zhao, Sukhithasri Vijayrajratnam, Joseph P. Vogel, Carrie L. Shaffer, Grant J. Jensen   +11 more
wiley   +1 more source

Transfer matrix analysis of one-dimensional majority cellular automata with thermal noise

, 2013
Thermal noise in a cellular automaton refers to a random perturbation to its function which eventually leads this automaton to an equilibrium state controlled by a temperature parameter. We study the 1-dimensional majority-3 cellular automaton under this
Lemoy, Rémi, Mozeika, Alexander, Seki, Shinnosuke   +2 more
core   +1 more source

Cell wall target fragment discovery using a low‐cost, minimal fragment library

FEBS Letters, EarlyView.
LoCoFrag100 is a fragment library made up of 100 different compounds. Similarity between the fragments is minimized and 10 different fragments are mixed into a single cocktail, which is soaked to protein crystals. These crystals are analysed by X‐ray crystallography, revealing the binding modes of the bound fragment ligands.
Kaizhou Yan, Mathew Stanley, Olawale Raimi, Andrew T. Ferenbach, Helge C Dorfmueller, Daan M. F. van Aalten   +5 more
wiley   +1 more source

Microstructure and Elements Concentration of Inconel 713LC during Laser Powder Bed Fusion through a Modified Cellular Automaton Model

Crystals, 2021
In this study, a hybrid finite element (FE) and cellular automaton (CA) model is developed to explore crystallization behavior and alloying of Inconel713LC during Laser powder bed fusion.
Amir Reza Ansari Dezfoli, Yu-Lung Lo, M. Mohsin Raza   +2 more
doaj   +1 more source

Structural insights into an engineered feruloyl esterase with improved MHET degrading properties

FEBS Letters, EarlyView.
A feruloyl esterase was engineered to mimic key features of MHETase, enhancing the degradation of PET oligomers. Structural and computational analysis reveal how a point mutation stabilizes the active site and reshapes the binding cleft, expading substrate scope.
Panagiota Karampa, Konstantinos Makryniotis, Theofani‐Iosifina Sousani, Evangelos Topakas, Vangelis Daskalakis, Maria Dimarogona   +5 more
wiley   +1 more source

The ubiquitin ligase RNF115 is required for the clearance of damaged lysosomes

FEBS Letters, EarlyView.
Upon lysosomal rupture, an E3 ubiquitin ligase RNF115 translocates from the cytosol to the damaged lysosomal membrane. Moreover, RNF115 depletion impairs the clearance of damaged lysosomes, identifying it as a key regulator of lysosomal quality control.
Sae Nakanaga, Toshiki Takahashi, Akiko Kuma, Hiroyuki Kawahara   +3 more
wiley   +1 more source

Phenotypic and genotypic characterization of single circulating tumor cells in the follow‐up of high‐grade serous ovarian cancer

Molecular Oncology, EarlyView.
Single circulating tumor cells (sCTCs) from high‐grade serous ovarian cancer patients were enriched, imaged, and genomically profiled using WGA and NGS at different time points during treatment. sCTCs revealed enrichment of alterations in Chromosomes 2, 7, and 12 as well as persistent or emerging oncogenic CNAs, supporting sCTC identity.
Carolin Salmon, Rui P. L. Neves, Nikolas H. Stoecklein, Sven‐Thorsten Liffers, Jens Siveke, Jan D. Kuhlmann, Pauline Wimberger, Paul Buderath, Rainer Kimmig, Sabine Kasimir‐Bauer   +9 more
wiley   +1 more source

Probabilistic cellular automata for interacting fermionic quantum field theories

Nuclear Physics B, 2021
A classical local cellular automaton can describe an interacting quantum field theory for fermions. We construct a simple classical automaton for a particular version of the Thirring model with imaginary coupling. This interacting fermionic quantum field
C. Wetterich
doaj   +1 more source

Restricted density classification in one dimension

, 2015
The density classification task is to determine which of the symbols appearing in an array has the majority. A cellular automaton solving this task is required to converge to a uniform configuration with the majority symbol at each site.
Taati, Siamak
core   +3 more sources