Results 81 to 90 of about 4,923 (198)

Programs for chemoinformatics and computational medicinal chemistry [PDF]

open access: yes, 2014
<p>Programs provided herein are a part of a freely available database of annotated compound data sets and software tools developed in our laboratory for chemoinformatics and computational medicinal chemistry.
Bajorath, Jürgen (5133368)   +3 more
core   +1 more source

Graph Kernels for Chemoinformatics [PDF]

open access: yes, 2011
The authors review graph kernels which is one of the state-of-the-art approaches using machine learning techniques for computational predictive modeling in chemoinformatics.
Masahiro Hattori   +3 more
core   +1 more source

PocketGraph : graph representation of binding site volumes [PDF]

open access: yes, 2009
The representation of small molecules as molecular graphs is a common technique in various fields of cheminformatics. This approach employs abstract descriptions of topology and properties for rapid analyses and comparison.
Weisel, Martin   +5 more
core   +1 more source

AlkaPlorer: A database‐driven explorer for natural alkaloids and derivatives

open access: yesJournal of Integrative Plant Biology, Volume 68, Issue 5, Page 1384-1398, May 2026.
The alkaloid database AlkaPlorer integrates over 130,000 compounds across 12,250 species. By linking chemical structures with biological and evolutionary data, it reveals how these molecules evolve and function. This platform serves as a vital resource for AI‐driven discovery in plant metabolism and modern drug development. ABSTRACT Alkaloids, renowned
Jiahao Li   +5 more
wiley   +1 more source

Challenges and Future Directions in Assessing the Quality and Completeness of Advanced Materials Safety Data for Re‐Usability: A Position Paper From the Nanosafety Community

open access: yesAdvanced Sustainable Systems, Volume 10, Issue 4, April 2026.
Nanosafety data provide a guiding example for establishing best practices in data management, aligning with FAIR principles and quality criteria. This review explores existing quality assessment approaches for reliability, relevance, and completeness, emphasizing the need for harmonization and adaptation to nanomaterials and advanced materials. The aim
Verónica I. Dumit   +43 more
wiley   +1 more source

An automated calculation pipeline for differential pair interaction energies with molecular force fields using the Tinker Molecular Modeling Package

open access: yesJournal of Cheminformatics
An automated pipeline for comprehensive calculation of intermolecular interaction energies based on molecular force-fields using the Tinker molecular modelling package is presented. Starting with non-optimized chemically intuitive monomer structures, the
Felix Bänsch   +4 more
doaj   +1 more source

Predicting zeta potential of liposomes from their structure: A nano-QSPR model for DOPE, DC-Chol, DOTAP, and EPC formulations

open access: yesComputational and Structural Biotechnology Journal
Liposomes, nanoscale spherical structures composed of amphiphilic lipids, hold great promise for various pharmaceutical applications, especially as nanocarriers in targeted drug delivery, due to their biocompatibility, biodegradability, and low ...
Kamila Jarzynska   +3 more
doaj   +1 more source

Solved and Unsolved Problems of Chemoinformatics

open access: yesMolecular Informatics, 2014
AbstractFrom humble beginnings in the Sixties chemoinformatics evolved into a scientific field of its own. Without the achievements of chemoinformatics the flood of information in chemistry would simply not be manageable and modern research in chemistry and related fields would be inconceivable.
openaire   +2 more sources

Identification of Plk1 type II inhibitors by structure-based virtual screening [PDF]

open access: yes, 2009
Protein kinases are targets for drug development. Dysregulation of kinase activity leads to various diseases, e.g. cancer, inflammation, diabetes. Human polo-like kinase 1 (Plk1), a serine/threonine kinase, is a cancer-relevant gene and a potential drug ...
G Schneider   +7 more
core   +1 more source

Molecular Similarity Approaches in Chemoinformatics: Early History and Literature Status [PDF]

open access: yes, 2016
Computed measures of molecular similarity play an important role in many aspects of chemoinformatics, including similarity searching, database clustering and molecular diversity analysis.
Willett, P., Peter Willett
core   +1 more source

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