Results 271 to 280 of about 673,559 (305)

Modelling ChIP-seq Data Using HMMs

2017
Chromatin ImmunoPrecipitation-sequencing (ChIP-seq) experiments have now become routine in biology for the detection of protein binding sites. In this chapter, we show how hidden Markov models can be used for the analysis of data generated by ChIP-seq experiments.
openaire   +2 more sources

Introduction to ChIP-Seq

2015
Introduction to ChIP-seq data analysis. Overview of quality control, mapping, peak calling and downstream analysis methods.
openaire  

Methods for ChIP-Seq Analysis: A Practical Workflow and Advanced Applications

Methods, 2021
Ryuichiro Nakato, Toyonori Sakata
exaly  

CoBRA: Containerized Bioinformatics Workflow for Reproducible ChIP/ATAC-Seq Analysis

Genomics, Proteomics and Bioinformatics, 2021
Henry W Long, Len Taing, Rinath Jeselsohn   +2 more
exaly  

ChIP-R: Assembling Reproducible Sets of ChIP-Seq and ATAC-Seq Peaks From Multiple Replicates

Genomics, 2021
Rhys Newell, Brad Balderson, Alexandra Essebier   +2 more
exaly  

ChIP-Seq

2010
Philippe Lefrançois, Wei Zheng, Michael Snyder   +2 more
openaire   +1 more source

AaHY5 ChIP-Seq Based on Transient Expression System Reveals the Role of AaWRKY14 in Artemisinin Biosynthetic Gene Regulation

Plant Physiology and Biochemistry, 2021
Dianjing Guo
exaly  

Using MACS to Identify Peaks From ChIP-Seq Data

Current Protocols in Bioinformatics, 2011
Yong Zhang, Jianxing Feng, Tao Liu
exaly  

ChIP‐Atlas: A Data‐Mining Suite Powered by Full Integration of Public ChIP‐Seq Data

EMBO Reports, 2018
Osamu Ogasawara, Hideya Kawaji, Hideki Hatanaka   +2 more
exaly  

Impact of Artifact Removal on ChIP Quality Metrics in ChIP-Seq and ChIP-Exo Data

Frontiers in Genetics, 2014
Rafik Salama, Rory Stark, Ines de Santiago   +2 more
exaly