Results 71 to 80 of about 443,532 (143)

A DNN Biophysics Model with Topological and Electrostatic Features [PDF]

arXiv
In this project, we provide a deep-learning neural network (DNN) based biophysics model to predict protein properties. The model uses multi-scale and uniform topological and electrostatic features generated with protein structural information and force field, which governs the molecular mechanics.
arxiv  

Protriever: End-to-End Differentiable Protein Homology Search for Fitness Prediction [PDF]

arXiv
Retrieving homologous protein sequences is essential for a broad range of protein modeling tasks such as fitness prediction, protein design, structure modeling, and protein-protein interactions. Traditional workflows have relied on a two-step process: first retrieving homologs via Multiple Sequence Alignments (MSA), then training models on one or more ...
arxiv  

Chromobox Protein Homolog 3 Is Essential for Stem Cell Differentiation to Smooth Muscles In Vitro and in Embryonic Arteriogenesis

Arteriosclerosis, Thrombosis and Vascular Biology, 2011
Q. Xiao, G. Wang, X. Yin, Zhenling Luo, A. Margariti, L. Zeng, M. Mayr, S. Ye, Qingbo Xu   +8 more
semanticscholar   +1 more source

RING finger gene 180 inhibits osteosarcoma progression through regulating chromobox homolog 4 ubiquitination. [PDF]

Cell Cycle, 2023
Zhao Q, Liu N, Xu T, Song K.
europepmc   +1 more source

NCAPG is transcriptionally regulated by CBX3 and activates the Wnt/β-catenin signaling pathway to promote proliferation and the cell cycle and inhibit apoptosis in colorectal cancer. [PDF]

J Gastrointest Oncol, 2023
Yang H, Pu L, Li R, Zhu R.
europepmc   +1 more source

Heterochromatin protein 1 (HP1) of Schistosoma mansoni: non-canonical chromatin landscape and oviposition effects. [PDF]

Mem Inst Oswaldo Cruz
da Trindade NS, Valentini MB, Rognon A, Mendes TMF, Gomes MS, Allegretti SM, Grunau C, Cabral FJ.   +7 more
europepmc   +1 more source

Transposable element dynamics in Xenopus laevis embryogenesis: a tale of two coexisting subgenomes. [PDF]

Mob DNA
Tittarelli E, Carotti E, Carducci F, Barucca M, Canapa A, Biscotti MA.   +5 more
europepmc   +1 more source

Integrated bioinformatics investigation and experimental validation reveals the clinical and biological significance of chromobox family in breast cancer. [PDF]

Sci Rep
Ge X, Lei S, Wang P, Wang W, Deng M, Niu G, Du P, Wang W.   +7 more
europepmc   +1 more source

The arms race of ray-finned fish against the derepression of LTR retroelements. [PDF]

Sci Rep
Carotti E, Tittarelli E, Carducci F, Barucca M, Canapa A, Biscotti MA.   +5 more
europepmc   +1 more source

An African swine fever virus Bc1-2 homolog, 5-HL, suppresses apoptotic cell death

Journal of Virology, 1996
C. Afonso, J. Neilan, G. Kutish, D. Rock
semanticscholar   +1 more source