A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure. [PDF]
BMC Bioinformatics, 2002 Eddy SR.
europepmc +1 more source
A fast ab-initio method for predicting miRNA precursors in genomes. [PDF]
Nucleic Acids Res, 2012 Tempel S, Tahi F.
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Deriving a probabilistic syntacto-semantic grammar for biomedicine based on domain-specific terminologies. [PDF]
J Biomed Inform, 2011 Fan JW, Friedman C.
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Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints. [PDF]
BMC Bioinformatics, 2006 Dowell RD, Eddy SR.
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Accelerated probabilistic inference of RNA structure evolution. [PDF]
BMC Bioinformatics, 2005 Holmes I.
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Information-theoretic uncertainty of SCFG-modeled folding space of the non-coding RNA. [PDF]
J Theor Biol, 2013 Manzourolajdad A +3 more
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RNA search with decision trees and partial covariance models. [PDF]
IEEE/ACM Trans Comput Biol Bioinform, 2009 Smith JA.
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Unifying syntactic theory and sentence processing difficulty through a connectionist minimalist parser. [PDF]
Cogn Neurodyn, 2009 Gerth S, Beim Graben P.
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Identifying novel sequence variants of RNA 3D motifs. [PDF]
Nucleic Acids Res, 2015 Zirbel CL +5 more
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