Results 1 to 10 of about 934 (108)

The complete chloroplast genome of Pollia japonica (Commelinaceae) from Southeast China [PDF]

Mitochondrial DNA. Part B. Resources, 2021
The complete chloroplast genome of Pollia japonica, a medicinal herb native to East Asia was characterized. The size of the chloroplast genome is 165,076 bp in length with a large single copy (LSC) of 90,722 bp, a small single copy (SSC) of 19,146 bp ...
Ye Gu, Qing Ma
doaj   +2 more sources

Insights into phylogenetic relationships and genome evolution of subfamily Commelinoideae (Commelinaceae Mirb.) inferred from complete chloroplast genomes [PDF]

BMC Genomics, 2021
Background Commelinaceae (Commelinales) comprise 41 genera and are widely distributed in both the Old and New Worlds, except in Europe. The relationships among genera in this family have been suggested in several morphological and molecular studies ...
Joonhyung Jung, Changkyun Kim, Joo-Hwan Kim   +2 more
doaj   +2 more sources

Characterization of the complete chloroplast genome of the perennial plant Tradescantia ohiensis Raf. (Commelinales: Commelinaceae) [PDF]

Mitochondrial DNA. Part B. Resources, 2021
Tradescantia ohiensis Raf. (Ohio spiderwort/blue-jacket) is a perennial herb native to North America that has become widely established in China. The chloroplast (cp) genome of T. ohiensis was assembled using Illumina sequencing reads.
Yang Liu, Guang-Chen Liu, Ye Xu
doaj   +2 more sources

Phylogenomic resolution of order- and family-level monocot relationships using 602 single-copy nuclear genes and 1375 BUSCO genes [PDF]

Frontiers in Plant Science, 2022
We assess relationships among 192 species in all 12 monocot orders and 72 of 77 families, using 602 conserved single-copy (CSC) genes and 1375 benchmarking single-copy ortholog (BUSCO) genes extracted from genomic and transcriptomic datasets ...
Prakash Raj Timilsena, Eric K. Wafula, Craig F. Barrett, Saravanaraj Ayyampalayam, Saravanaraj Ayyampalayam, Joel R. McNeal, Jeremy D. Rentsch, Michael R. McKain, Karolina Heyduk, Alex Harkess, Matthieu Villegente, John G. Conran, Nicola Illing, Bruno Fogliani, Cécile Ané, Cécile Ané, J. Chris Pires, Jerrold I. Davis, Wendy B. Zomlefer, Dennis W. Stevenson, Sean W. Graham, Thomas J. Givnish, James Leebens-Mack, Claude W. dePamphilis   +23 more
doaj   +2 more sources

The complete chloroplast genome of Eichhornia crassipes (Pontederiaceae) and phylogeny of commelinids [PDF]

Mitochondrial DNA. Part B. Resources, 2019
Eichhornia crassipes is a floating aquatic plant native to the American tropics. Here we reported and characterized the first complete chloroplast (cp) genome of Eichhornia crassipes and analyzed the phylogenomic relationship of Commelinids based on ...
Qing Ma, Yin Lu
doaj   +2 more sources

Revisiting the taxonomy of the Neotropical Haemodoraceae (Commelinales) [PDF]

PhytoKeys, 2020
Based on extensive herbarium, field, botanical illustration, and molecular phylogenetic research, five genera and eight species are recognised for the Neotropical Haemodoraceae. New taxa include Cubanicula Hopper et al., Xiphidium pontederiiflorum M.Pell.
Marco O. O. Pellegrini, Ellen J. Hickman, Jorge E. Guttiérrez, Rhian J. Smith, Stephen D. Hopper   +4 more
doaj   +4 more sources

RNA editing in the chloroplast of Asian Palmyra palm (Borassus flabellifer) [PDF]

Genetics and Molecular Biology, 2020
We have identified 46 RNA editing sites located in 20 chloroplast (cp) genes of Borassus flabellifer (Asian Palmyra palm), family Arecaceae, and tested these genes for supporting phylogenetic study among the commelinids. Among the 46 sites, 43 sites were
Arpakorn Sakulsathaporn, Passorn Wonnapinij, Anongpat Suttangkakul, Somsak Apisitwanich, Supachai Vuttipongchaikij   +4 more
doaj   +2 more sources

The complete chloroplast genome sequence of Belosynapsis ciliata (Blume) R. S. Rao (Commelinaceae) [PDF]

Mitochondrial DNA. Part B. Resources, 2019
Belosynapsis is a small genus of mainly perennial herbs in the family Commenlinaceae, comprising about six species native to Southeast Asia, the Indian subcontinent, Papuasia, and southern China.
Wei Guo, Yufen Xu, Wei Wu, Youhua Ye, Ping Chen   +4 more
doaj   +2 more sources

Historical biogeography and plastome evolution of Commelinaceae Mirb. (Commelinales) corroborate the East Gondwanan origins [PDF]

BMC Plant Biology
Background Commelinaceae are a Pantropical monocot family comprising ca. 36 genera and 810 species. Due to the high morphological variation and limited sampling, the relationships within the family remain unclear.
Joonhyung Jung, Marco O. O. Pellegrini, Joo-Hwan Kim   +2 more
doaj   +2 more sources

A new interpretation on vascular architecture of the cauline system in Commelinaceae (Commelinales). [PDF]

PLoS ONE, 2019
The vascular system of monocotyledons, including Commelinaceae, has been studied since the 19th century, but to date, the proposed vascular architecture models consist of schematic representations partially based on the authors' interpretation.
Ricardo Sb Vita, Nanuza L Menezes, Marco Oo Pellegrini, Gladys Fa Melo-de-Pinna   +3 more
doaj   +2 more sources