Results 111 to 120 of about 6,361 (264)

Modular automated high‐throughput isolation and phylogenetic identification of bacteria from complex microbiomes

iMetaOmics, Volume 2, Issue 4, December 2025.
Metagenomic analysis can generate hypotheses about microbiome interactions and function, yet mechanistic understanding is only possible through precise experimentation manipulating its microbiota composition. The high‐throughput isolation of microbiome members thus represents a core resource in this field of research.
Rubén Chaboy‐Cansado, Silvia Talavera‐Marcos, Ramón Gallego‐Simón, Paula Cobeta, Gabriel Roscales, Alberto Rastrojo, Daniel Aguirre de Cárcer   +6 more
wiley   +1 more source

Prevotella ihumii sp. nov., a new bacterium isolated from a stool specimen of a healthy woman

New Microbes and New Infections, 2019
Prevotella ihumii strain Marseille-P3385T (= CSURP3385T; = DSM106428T) is a new species isolated from a fresh stool specimen of a healthy woman.
H. Anani, E. Guilhot, C. Andrieu, A. Fontanini, D. Raoult, P.E. Fournier   +5 more
doaj   +1 more source

Enhancing Salmonella Inhibition in Black Soldier Fly Larvae (Hermetia illucens L.) Conversion by Bioaugmentation With Gut Microbiota

Microbial Biotechnology, Volume 18, Issue 12, December 2025.
In this study, we demonstrated that the gut microbial communities of BSFL play an important role in enhancing the reduction of Salmonella. Using culturomic and in vivo tests, we isolated functional gut bacteria from the gut of BSFL that enhance the biosafety of organic waste conversion by BSFL.
Yuanpu Zhang, Wen Chen, Binbin Wang, Kashif ur Rehman, Arnold van Huis, Ahmed R. Henawy, Minmin Cai, Longyu Zheng, Zhuqing Ren, Feng Huang, Jibin Zhang   +10 more
wiley   +1 more source

Noncontiguous finished genome sequences and descriptions of Actinomyces ihuae, Actinomyces bouchesdurhonensis, Actinomyces urinae, Actinomyces marseillensis, Actinomyces mediterranea and Actinomyces oralis sp. nov. identified by culturomics

New Microbes and New Infections, 2018
The taxonogenomic approach, including the culturomics techniques, is now currently used to isolate and characterize new bacteria. These approaches notably allowed us to discover six new species of the Actinomyces genus: Actinomyces ihuae strain SD1 ...
M.D. Mbogning Fonkou, M. Mailhe, S. Ndongo, D. Ricaboni, A. Morand, F. Cornu, M. Tidjani Alou, M. Bilen, C. Andrieu, A. Levasseur, F. Cadoret, D. Raoult   +11 more
doaj   +1 more source

Molecular characterization of gut microbiome in weaning pigs supplemented with multi-strain probiotics using metagenomic, culturomic, and metabolomic approaches [PDF]

, 2022
Woong Ji Lee, Sangdon Ryu, An Na Kang, Minho Song, Minhye Shin, Sangnam Oh, Younghoon Kim   +6 more
openalex   +1 more source

Prospects and perils in the geospatial turn of conservation

Conservation Biology, Volume 39, Issue 6, December 2025.
Abstract Conservation has embraced advances in big data and related digital technologies as key to preventing biodiversity loss, especially in the identification of areas of conservation priority based on spatial data, which we call the big geospatial data turn.
Jocelyne Shimin Sze, Laura Aileen Sauls
wiley   +1 more source

Exploring the Microbiota of Diabetic Foot Infections With Culturomics [PDF]

Frontiers in Cellular and Infection Microbiology, 2018
The purpose of this prospective observational study was to evaluate the richness and diversity of bacteria in samples from diabetic foot infections using a culturomics approach. Bacterial culture findings from wound samples were analyzed together with clinical characteristics and treatment outcomes. We included 43 patients admitted to a French referral
Joanne Jneid, Nadim Cassir, Sophie Schuldiner, Nathalie Jourdan, Albert Sotto, Albert Sotto, Jean-Philippe Lavigne, Jean-Philippe Lavigne, Bernard La Scola   +8 more
openaire   +3 more sources

Enterobacter timonensis sp. nov., a new bacterium isolated from a fresh human stool specimen

New Microbes and New Infections, 2019
Enterobacter timonensis strain mt20T (= CSUR P2201T, = DSM101775T) is a new species isolated from a fresh human stool specimen.
T. Takakura, H. Anani, A. Fadlane, A. Fontanini, D. Raoult, J.Y. Bou Khalil   +5 more
doaj   +1 more source

Digital Conservation Can Fill Data Gaps in Data‐Poor Regions: Case of Elasmobranchs in India

Aquatic Conservation: Marine and Freshwater Ecosystems, Volume 35, Issue 11, November 2025.
ABSTRACT Internet and social media use have increased significantly over the past decade, resulting in huge volumes of biodiversity data that are potentially cost‐effective means to better inform biodiversity conservation and resource management. We examine the role of digital conservation in a data‐poor context of the Global South, using sharks and ...
Shruthi Kottillil, Sudha Kottillil, Yarlagadda Chaitanya Krishna, Francesco Ferretti, Divya Karnad   +4 more
wiley   +1 more source

Identification of Clostridioides difficile-Inhibiting Gut Commensals Using Culturomics, Phenotyping, and Combinatorial Community Assembly

mSystems, 2020
A major function of the gut microbiota is to provide colonization resistance, wherein pathogens are inhibited or suppressed below infectious levels. However, the fraction of gut microbiota required for colonization resistance remains unclear.
Sudeep Ghimire, Chayan Roy, Supapit Wongkuna, Linto Antony, Abhijit Maji, Mitchel Chan Keena, Andrew Foley, Joy Scaria   +7 more
doaj   +1 more source