Results 1 to 10 of about 43,426,423 (379)

EEG-BIDS, an extension to the brain imaging data structure for electroencephalography. [PDF]

Sci Data, 2019
The Brain Imaging Data Structure (BIDS) project is a rapidly evolving effort in the human brain imaging research community to create standards allowing researchers to readily organize and share study data within and between laboratories.
Pernet CR, Appelhoff S, Gorgolewski KJ, Flandin G, Phillips C, Delorme A, Oostenveld R.   +6 more
europepmc   +2 more sources

iEEG-BIDS, extending the Brain Imaging Data Structure specification to human intracranial electrophysiology. [PDF]

Sci Data, 2019
The Brain Imaging Data Structure (BIDS) is a community-driven specification for organizing neuroscience data and metadata with the aim to make datasets more transparent, reusable, and reproducible.
Holdgraf C, Appelhoff S, Bickel S, Bouchard K, D'Ambrosio S, David O, Devinsky O, Dichter B, Flinker A, Foster BL, Gorgolewski KJ, Groen I, Groppe D, Gunduz A, Hamilton L, Honey CJ, Jas M, Knight R, Lachaux JP, Lau JC, Lee-Messer C, Lundstrom BN, Miller KJ, Ojemann JG, Oostenveld R, Petridou N, Piantoni G, Pigorini A, Pouratian N, Ramsey NF, Stolk A, Swann NC, Tadel F, Voytek B, Wandell BA, Winawer J, Whitaker K, Zehl L, Hermes D.   +38 more
europepmc   +2 more sources

Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data [PDF]

Frontiers in Neuroscience, 2022
The Brain Imaging Data Structure (BIDS) is a specification for organizing, sharing, and archiving neuroimaging data and metadata in a reusable way. First developed for magnetic resonance imaging (MRI) datasets, the community-led specification evolved ...
Marie-Hélène Bourget, Lee Kamentsky, Satrajit S. Ghosh, Satrajit S. Ghosh, Giacomo Mazzamuto, Giacomo Mazzamuto, Alberto Lazari, Christopher J. Markiewicz, Robert Oostenveld, Robert Oostenveld, Guiomar Niso, Yaroslav O. Halchenko, Ilona Lipp, Sylvain Takerkart, Paule-Joanne Toussaint, Ali R. Khan, Gustav Nilsonne, Gustav Nilsonne, Filippo Maria Castelli, The BIDS Maintainers, Julien Cohen-Adad, Julien Cohen-Adad, Julien Cohen-Adad, Stefan Appelhoff, Ross Blair, Eric Earl, Franklin Feingold, Anthony Galassi, Rémi Gau, Christopher J. Markiewicz, Taylor Salo   +30 more
doaj   +2 more sources

MEG-BIDS, the brain imaging data structure extended to magnetoencephalography. [PDF]

Sci Data, 2018
We present a significant extension of the Brain Imaging Data Structure (BIDS) to support the specific aspects of magnetoencephalography (MEG) data. MEG measures brain activity with millisecond temporal resolution and unique source imaging capabilities ...
Niso G, Gorgolewski KJ, Bock E, Brooks TL, Flandin G, Gramfort A, Henson RN, Jas M, Litvak V, T Moreau J, Oostenveld R, Schoffelen JM, Tadel F, Wexler J, Baillet S.   +14 more
europepmc   +2 more sources

Data visualisation approaches for component network meta-analysis: visualising the data structure. [PDF]

BMC Med Res Methodol, 2023
Freeman SC, Saeedi E, Ordóñez-Mena JM, Nevill CR, Hartmann-Boyce J, Caldwell DM, Welton NJ, Cooper NJ, Sutton AJ.   +8 more
europepmc   +3 more sources

Initialization is critical for preserving global data structure in both t-SNE and UMAP

Nature Biotechnology, 2021
1Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany. 2Applied Mathematics Program, Yale University, New Haven, CT, USA. ✉e-mail: dmitry.kobak@uni-tuebingen.de; george.linderman@yale.edu One of the most ubiquitous analysis tools ...
D. Kobak, G. Linderman
semanticscholar   +1 more source

MathOptInterface: A Data Structure for Mathematical Optimization Problems [PDF]

INFORMS journal on computing, 2020
We introduce MathOptInterface, an abstract data structure for representing mathematical optimization problems based on combining pre-defined functions and sets.
B. Legat, O. Dowson, Joaquim Dias Garcia, Miles Lubin   +3 more
semanticscholar   +1 more source

A New Measure to Characterize the Self-Similarity of Binary Time Series and its Application

IEEE Access, 2021
In this study, the branch-length similarity entropy profile is estimated by mapping the time-series signal to the circumference of the time circle, and the self-similarity is defined based on the profile.
Sang-Hee Lee, Cheol-Min Park
doaj   +1 more source

Ggtree: A serialized data object for visualization of a phylogenetic tree and annotation data

iMeta, 2022
While phylogenetic trees and associated data have been getting easier to generate, it has been difficult to reuse, combine, and synthesize the information they provided, because published trees are often only available as image files and associated data ...
Shuangbin Xu, Lin Li, Xiao Luo, Meijun Chen, Wenli Tang, Li Zhan, Zehan Dai, Tommy T. Lam, Yi Guan, Guangchuang Yu   +9 more
doaj   +1 more source

Data Structures for Mobile Data [PDF]

Journal of Algorithms, 1999
The authors present a set of novel data structures for the efficient maintenance of various continuous and discrete attributes of mobile data. A Kinetic Data Structure (KDS) maintains an attribute of interest in a system of geometric objects undergoing continuous motion.
Basch, Julien, Guibas, Leonidas J., Hershberger, John   +2 more
openaire   +2 more sources