Results 1 to 10 of about 13,337 (203)

FleQ-Dependent regulation of the ribonucleotide reductase repressor NrdR in Pseudomonas aeruginosa during biofilm growth and infection [PDF]

open access: yesScientific Reports
Ribonucleotide reductases (RNRs) are essential enzymes that catalyze the conversion of ribonucleotides to deoxyribonucleotides (dNTPs), a critical step in DNA synthesis and repair.
Domingo Marchan   +6 more
doaj   +2 more sources

The effect of chlorination of nucleotide bases on the conformational properties of thymidine monophosphate [PDF]

open access: yesThe Ukrainian Biochemical Journal, 2015
Recent studies on Escherichia coli bacteria cultivation, in which DNA thymine was replaced with 5-chlorouracil have refreshed the problem of understanding the changes to physical properties of DNA monomers resultant from chemical modifications.
T. M. Mukhina, T. Yu. Nikolaienko
doaj   +1 more source

A Novel One-Pot Enzyme Cascade for the Biosynthesis of Cladribine Triphosphate

open access: yesBiomolecules, 2021
Cladribine triphosphate is the active compound of the anti-cancer and multiple sclerosis drug Mavenclad (cladribine). Biosynthesis of such non-natural deoxyribonucleotides is challenging but important in order to study the pharmaceutical modes of action.
Julia Frisch   +2 more
doaj   +1 more source

A rapid and sensitive assay for quantifying the activity of both aerobic and anaerobic ribonucleotide reductases acting upon any or all substrates

open access: yesPLoS ONE, 2022
Ribonucleotide reductases (RNRs) use radical-based chemistry to catalyze the conversion of all four ribonucleotides to deoxyribonucleotides. The ubiquitous nature of RNRs necessitates multiple RNR classes that differ from each other in terms of the ...
Talya S. Levitz   +5 more
doaj   +2 more sources

Enzyme kinetics of the mitochondrial deoxyribonucleoside salvage pathway are not sufficient to support rapid mtDNA replication. [PDF]

open access: yesPLoS Computational Biology, 2011
Using a computational model, we simulated mitochondrial deoxynucleotide metabolism and mitochondrial DNA replication. Our results indicate that the output from the mitochondrial salvage enzymes alone is inadequate to support a mitochondrial DNA ...
Vishal V Gandhi, David C Samuels
doaj   +1 more source

Deoxyribonucleotide Pools during Liver Regeneration [PDF]

open access: yesEuropean Journal of Biochemistry, 1973
The intracellular pools of deoxyribonucleotides were analyzed during liver regeneration in rats. In normal liver the content of dATP, dCTP, dGTP and dTTP was found to be 0.3, 1.3, 0.3 and 0.4 pmol per μg DNA, respectively. When the liver tissue started to proliferate the pools of the individual deoxyribonucleoside triphosphates increased and reached ...
S S, Söderhäll, A, Larsson, K L, Skoog
openaire   +2 more sources

Characterisation of an Escherichia coli line that completely lacks ribonucleotide reduction yields insights into the evolution of parasitism and endosymbiosis

open access: yeseLife, 2023
Life requires ribonucleotide reduction for de novo synthesis of deoxyribonucleotides. As ribonucleotide reduction has on occasion been lost in parasites and endosymbionts, which are instead dependent on their host for deoxyribonucleotide synthesis, it ...
Samantha DM Arras   +11 more
doaj   +1 more source

Quantitation of DNA by nuclease P1 digestion and UPLC-MS/MS to assess binding efficiency of pyrrolobenzodiazepine

open access: yesJournal of Pharmaceutical Analysis, 2020
Accurate DNA quantitation is a prerequisite in many biomedical and pharmaceutical studies. Here we established a new DNA quantitation method by nuclease P1 digestion and UPLC-MS/MS analysis.
Yong Ma, Buyun Chen, Donglu Zhang
doaj   +1 more source

The Origin and Evolution of Ribonucleotide Reduction

open access: yesLife, 2015
Ribonucleotide reduction is the only pathway for de novo synthesis of deoxyribonucleotides in extant organisms. This chemically demanding reaction, which proceeds via a carbon-centered free radical, is catalyzed by ribonucleotide reductase (RNR).
Daniel Lundin   +3 more
doaj   +1 more source

Glutamine deprivation induces abortive s-phase rescued by deoxyribonucleotides in k-ras transformed fibroblasts. [PDF]

open access: yesPLoS ONE, 2009
BackgroundOncogene activation plays a role in metabolic reprogramming of cancer cells. We have previously shown that K-ras transformed fibroblasts have a stronger dependence on glycolysis and a reduced oxidative phosphorylation ability as compared to ...
Daniela Gaglio   +4 more
doaj   +1 more source

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