Results 131 to 140 of about 62,722 (247)

Multi‐omics and low‐input proteomics profiling reveals dynamic regulation driving pluripotency initiation in early mouse embryos

FEBS Open Bio, EarlyView.
Mouse pre‐implantation development involves a transition from totipotency to pluripotency. Integrating transcriptomics, epigenetic profiling, low‐input proteomics and functional assays, we show that eight‐cell embryos retain residual totipotency features, whereas cytoskeletal remodeling regulated by the ubiquitin‐proteasome system drives progression ...
Wanqiong Li, Xi Xiao, Lingbin Qi, Chanyi Li, Sirui Song, Jiaying Qin, Zhigang Xue, Jinfeng Xue, Huaifang Li   +8 more
wiley   +1 more source

Thermodynamic Data Remain a Hot Tip for Decoding Binding Affinity and Water Impact on Protein-Ligand Complex Formation to Assist Lead Optimization. [PDF]

J Med Chem
Klebe G.
europepmc   +1 more source

Parameter estimation in stochastic chemical kinetic models using derivative free optimization and bootstrapping. [PDF]

Comput Chem Eng, 2014
Srivastava R, Rawlings JB.
europepmc   +1 more source

A light‐triggered Time‐Resolved X‐ray Solution Scattering (TR‐XSS) workflow with application to protein conformational dynamics

FEBS Open Bio, EarlyView.
Time‐resolved X‐ray solution scattering captures how proteins change shape in real time under near‐native conditions. This article presents a practical workflow for light‐triggered TR‐XSS experiments, from data collection to structural refinement. Using a calcium‐transporting membrane protein as an example, the approach can be broadly applied to study ...
Fatemeh Sabzian‐Molaei, Fredrik Orädd, Konstantinos Magkakis, Magnus Andersson   +3 more
wiley   +1 more source

Directional adaptive mode total variation for seismic data denoising. [PDF]

Sci Rep
Banjade TP, Zhou C, Yang Y, Li H, Deng J.   +4 more
europepmc   +1 more source

Promiscuous stimulation of HSP70 ATPase activity by parasite‐derived J‐domains

FEBS Open Bio, EarlyView.
The malaria parasite Plasmodium falciparum exports three highly homologous yet functionally divergent J‐domain proteins into human erythrocytes. Here, we show that J‐domains isolated from all three proteins effectively stimulate the ATPase activity of both endogenous host and exported parasite HSP70 chaperones.
Julian Barth, Moritz Koch, Le‐Han Rössner, Johanna Eichhorn, Denys Pogoryelov, Matthias P. Mayer, Jude M. Przyborski   +6 more
wiley   +1 more source

An Inverse Problem for a Fractional Space-Time Diffusion Equation with Fractional Boundary Condition. [PDF]

Entropy (Basel)
Brociek R, Wajda A, Napoli C, Capizzi G, Słota D.   +4 more
europepmc   +1 more source

Chameleon sequences reveal structural effects in proteins representing micelle‐like distribution of hydrophobicity

FEBS Open Bio, EarlyView.
Amino acids sequence of two different proteins with the same sequence (chameleon sequence—black boxes) represent in 3D structure of the proteins different secondary structures: HHHH—helical and BBB—Beta‐structural. The chains folded in water environment adopt different III‐order structures in which the chameleon fragments appear to adopt similar status
Irena Roterman, Katarzyna Stapor, Leszek Konieczny, Krzysztof Gądek, Piotr Nowakowski   +4 more
wiley   +1 more source

Molecular insights into the bioactivity of H-thiazine compounds against breast cancer cells: a computational study. [PDF]

In Silico Pharmacol
Mogoane LM, Obakachi VA, Govender PP, Govender KK.   +3 more
europepmc   +1 more source

Constrained Multiobjective Derivative-free Optimization

O presente trabalho centra-se na otimização multiobjetivo sem derivadas, propondo estratégias para abordar problemas com restrições. Para tal, foi desenvolvido um método de pesquisa múltipla direta, DMS-FILTER-IR, que combina uma estratégia baseada em filtro com uma fase de restauração inexata.
openaire   +1 more source