Dirichlet process mixture models for single-cell RNA-seq clustering [PDF]
Clustering of cells based on gene expression is one of the major steps in single-cell RNA-sequencing (scRNA-seq) data analysis. One key challenge in cluster analysis is the unknown number of clusters and, for this issue, there is still no comprehensive ...
Nigatu A. Adossa +2 more
doaj +2 more sources
A tutorial on Dirichlet Process mixture modeling. [PDF]
Bayesian nonparametric (BNP) models are becoming increasingly important in psychology, both as theoretical models of cognition and as analytic tools. However, existing tutorials tend to be at a level of abstraction largely impenetrable by non-technicians.
Li Y, Schofield E, Gönen M.
europepmc +2 more sources
A Dirichlet Process Prior Approach for Covariate Selection [PDF]
The variable selection problem in general, and specifically for the ordinary linear regression model, is considered in the setup in which the number of covariates is large enough to prevent the exploration of all possible models.
Stefano Cabras
doaj +2 more sources
From here to infinity: sparse finite versus Dirichlet process mixtures in model-based clustering. [PDF]
In model-based clustering mixture models are used to group data points into clusters. A useful concept introduced for Gaussian mixtures by Malsiner Walli et al.
Frühwirth-Schnatter S +1 more
europepmc +2 more sources
Non-parametric genetic prediction of complex traits with latent Dirichlet process regression models. [PDF]
Using genotype data to perform accurate genetic prediction of complex traits can facilitate genomic selection in animal and plant breeding programs, and can aid in the development of personalized medicine in humans.
Zeng P, Zhou X.
europepmc +2 more sources
In this paper, we develop a novel variational Bayesian learning method for the Dirichlet process (DP) mixture of the inverted Dirichlet distributions, which has been shown to be very flexible for modeling vectors with positive elements.
Zhan-Yu Ma +5 more
semanticscholar +3 more sources
Multimodal Hierarchical Dirichlet Process-Based Active Perception by a Robot [PDF]
In this paper, we propose an active perception method for recognizing object categories based on the multimodal hierarchical Dirichlet process (MHDP). The MHDP enables a robot to form object categories using multimodal information, e.g., visual, auditory,
Tadahiro Taniguchi +2 more
doaj +2 more sources
Genome-scale MicroRNA target prediction through clustering with Dirichlet process mixture model [PDF]
Background MicroRNA regulation is fundamentally responsible for fine-tuning the whole gene network in human and has been implicated in most physiological and pathological conditions.
Zeynep Hakguder +4 more
doaj +2 more sources
Clustering consistency with Dirichlet process mixtures [PDF]
Dirichlet process mixtures are flexible nonparametric models, particularly suited to density estimation and probabilistic clustering. In this work we study the posterior distribution induced by Dirichlet process mixtures as the sample size increases ...
F. Ascolani +3 more
semanticscholar +1 more source
A Dirichlet Process Mixture of Robust Task Models for Scalable Lifelong Reinforcement Learning [PDF]
While reinforcement learning (RL) algorithms are achieving state-of-the-art performance in various challenging tasks, they can easily encounter catastrophic forgetting or interference when faced with lifelong streaming information.
Zhi Wang, Chun-Lin Chen, Daoyi Dong
semanticscholar +1 more source

