Results 11 to 20 of about 3,598,749 (292)

Batch optimization for balanced binary sequences and DNA sequences [PDF]

open access: yesBMC Bioinformatics
Background DNA data storage offers exceptional density and longevity, but its practicality is hampered by the high cost and low throughput of de novo DNA synthesis.
Yiming Ma
doaj   +2 more sources

Peptide vocabulary analysis reveals ultra-conservation and homonymity in protein sequences [PDF]

open access: yes, 2007
A new algorithm is presented for vocabulary analysis (word detection) in texts of human origin. It performs at 60%–70% overall accuracy and greater than 80% accuracy for longer words, and approximately 85% sensitivity on Alice in Wonderland, a ...
Gatherer, D.   +2 more
core   +14 more sources

Superstatistics Applied to Cucurbitaceae DNA Sequences [PDF]

open access: yesEntropy
The short and long statistical correlations are essential in the genomic sequence. Such correlations are long-range for introns, whereas, for exons, these are short.
M. O. Costa   +3 more
doaj   +2 more sources

Investigation of distal repetitive sequences in the genus allium [PDF]

open access: yes, 2009
PhDThe telomere is a DNA/protein structure required to maintain the ends of linear chromosomes. Usually the DNA component comprises a highly conserved tandemly repeated minisatellite sequence.
Chester, Michael
core   +4 more sources

Tomato protoplast DNA transformation: physical linkage and recombination of exogenous DNA sequences [PDF]

open access: yes, 1987
Tomato protoplasts have been transformed with plasmid DNA's, containing a chimeric kanamycin resistance gene and putative tomato origins of replication.
Zabel, Pim   +11 more
core   +2 more sources

Compiling Multicopy Single-Stranded DNA Sequences from Bacterial Genome Sequences [PDF]

open access: yesGenomics & Informatics, 2016
A retron is a bacterial retroelement that encodes an RNA gene and a reverse transcriptase (RT). The former, once transcribed, works as a template primer for reverse transcription by the latter.
Wonseok Yoo, Dongbin Lim, Sangsoo Kim
doaj   +1 more source

DNA Sequencing [PDF]

open access: yesCirculation, 2012
We are in the midst of a time of great change in genetics that may dramatically impact human biology and medicine. The completion of the human genome project,1,2 the development of low cost, high-throughput parallel sequencing technology, and large-scale studies of genetic variation3 have provided a rich set of techniques and data for the study of ...
Frederick E, Dewey   +4 more
openaire   +2 more sources

MCALIGN2: Faster, accurate global pairwise alignment of non-coding DNA sequences based on explicit models of indel evolution [PDF]

open access: yes, 2006
Background Non-coding DNA sequences comprise a very large proportion of the total genomic content of mammals, most other vertebrates, many invertebrates, and most plants. Unraveling the functional significance of non-coding DNA depends on how well we are
Johnson Toby   +5 more
core   +1 more source

A Reference-Free Lossless Compression Algorithm for DNA Sequences Using a Competitive Prediction of Two Classes of Weighted Models

open access: yesEntropy, 2019
The development of efficient data compressors for DNA sequences is crucial not only for reducing the storage and the bandwidth for transmission, but also for analysis purposes.
Diogo Pratas   +3 more
doaj   +1 more source

MCALIGN: Stochastic Alignment of Noncoding DNA Sequences Based on an Evolutionary Model of Sequence Evolution [PDF]

open access: yes, 2004
A method is described for performing global alignment of noncoding DNA sequences based on an evolutionary model parameterized by the frequency distribution of lengths of insertion/deletion events (indels) and their rate relative to nucleotide ...
Johnson, Toby   +3 more
core   +1 more source

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