Results 111 to 120 of about 50,367 (275)
FEBS Open Bio, EarlyView.Time‐resolved X‐ray solution scattering captures how proteins change shape in real time under near‐native conditions. This article presents a practical workflow for light‐triggered TR‐XSS experiments, from data collection to structural refinement. Using a calcium‐transporting membrane protein as an example, the approach can be broadly applied to study ...
Fatemeh Sabzian‐Molaei +3 more
wiley +1 more source
A Novel Parallel Algorithm for Edit Distance Computation
Mehran University Research Journal of Engineering and Technology, 2018 The edit distance between two sequences is the minimum number of weighted transformation-operations that are required to transform one string into the other. The weighted transformation-operations are insert, remove, and substitute.
Muhammad Murtaza Yousaf +4 more
doaj
Visualization of Topological Pharmacophore Space with Graph Edit Distance. [PDF]
ACS Omega, 2022 Nakano H, Miyao T.
europepmc +1 more source
Tree Edit Distance Learning via Adaptive Symbol Embeddings
, 2018 Metric learning has the aim to improve classification accuracy by learning a distance measure which brings data points from the same class closer together and pushes data points from different classes further apart.
Gallicchio, Claudio +3 more
core
FEBS Open Bio, EarlyView.In this study, we developed a deep learning method for mitotic figure counting in H&E‐stained whole‐slide images and evaluated its prognostic impact in 13 external validation cohorts from seven different cancer types. Patients with more mitotic figures per mm2 had significantly worse patient outcome in all the studied cancer types except colorectal ...
Joakim Kalsnes +32 more
wiley +1 more source
Imaging-based representation and stratification of intra-tumor heterogeneity via tree-edit distance. [PDF]
Sci Rep, 2022 Cavinato L +5 more
europepmc +1 more source
The Edit Distance Function and Symmetrization [PDF]
The Electronic Journal of Combinatorics, 2013 The edit distance between two graphs on the same labeled vertex set is the size of the symmetric difference of the edge sets. The distance between a graph, G, and a hereditary property, ℋ, is the minimum of the distance between G and each G'∈ℋ. The edit distance function of ℋ is a function of p∈[0,1] and is the limit of the maximum normalized ...
openaire +3 more sources
Single‐molecule DNA flow‐stretch assays for high‐throughput DNA–protein interaction studies
FEBS Open Bio, EarlyView.We describe an optimised single‐molecule DNA flow‐stretch assay that visualises DNA–protein interactions in real time. Linear DNA fragments are tethered to a surface and stretched by buffer flow for fluorescence imaging. Using λ and φX174 DNA, this protocol enhances reproducibility and accessibility, providing a versatile approach for studying diverse ...
Ayush Kumar Ganguli +8 more
wiley +1 more source
Author Correction: Imaging-based representation and stratification of intra-tumor heterogeneity via tree-edit distance. [PDF]
Sci Rep, 2022 Cavinato L +5 more
europepmc +1 more source
Lower Bounding Edit Distances between Permutations [PDF]
SIAM Journal on Discrete Mathematics, 2013 A number of fields, including the study of genome rearrangements and the design of interconnection networks, deal with the connected problems of sorting permutations in "as few moves as possible", using a given set of allowed operations, or computing the number of moves the sorting process requires, often referred to as the \emph{distance} of the ...
openaire +3 more sources