Genomic prediction with kinship-based multiple kernel learning produces hypothesis on the underlying inheritance mechanisms of phenotypic traits. [PDF]
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Data-driven protease engineering by DNA-recording and epistasis-aware machine learning. [PDF]
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MoCHI: neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational scanning data. [PDF]
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Intramolecular epistasis correlates with divergence of specificity in promiscuous and bifunctional NSAR/OSBS enzymes. [PDF]
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The Role of Pleiotropy and Epistasis on Evolvability and Robustness in a Two-Peak Fitness Landscape. [PDF]
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Bayesian inference of fitness landscapes via tree-structured branching processes. [PDF]
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Compensatory Evolution Following Deleterious Episodes of GC-biased Gene Conversion in Rodents. [PDF]
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