Results 101 to 110 of about 3,154,512 (215)

Evaluation of genomic SSRs and EST-SSRs markers in genetic diversity studies in European Chestnut populations.

, 2010
Adaptive potential and phenotypic plasticity determine the capacity of the species to adapt to new environmental changes. In this study, six genomic (SSRs) and 11 genic (EST-SSRs) microsatellites markers were used to estimate neutral and adaptive genetic
D Taurchini, C Mattioni, M Cherubini, F Villani, MA Martin   +4 more
core  

Tm, PIC, Rp, Na, Ne, I and He values recorded for thirty-one EST-SSRs and twelve genomic SSRs.

, 2015
Tm = Annealing temperature, PIC = Polymorphism information content, Rp = Resolving power, Na = number of alleles, Ne = genetic diversity, I = Shannons index and He = Nei’s genetic diversityTm, PIC, Rp, Na, Ne, I and He values recorded for thirty-one EST ...
Prapti Prakash (797497), Shiv Kumar (634406), Neelu Jain (702079), Ashutosh Sarker (634404), Muraleedhar Sidaram Aski (797496), Akanksha Singh (382536), Suresh Meena (797498), Harsh Kumar Dikshit (4607413), Dharmendra Singh (572349)   +8 more
core   +1 more source

Identification of EST–SSRs and molecular diversity analysis in Mentha piperita

Crop Journal, 2015
EST sequences of Mentha piperita available in the public domain (NCBI) were exploited to develop SSR markers. A total of 1316 ESTs were assembled into 155 contigs and 653 singletons and of these, 110 sequences were found to contain 130 SSRs, with a ...
Birendra Kumar , Umesh Kumar , Hemant Kumar Yadav   +2 more
doaj   +1 more source

Identification, characterization and mapping of EST-derived SSRs from the cacao-Ceratocystis cacaofunesta interaction

, 2013
Ceratocystis cacaofunesta is an ascomycete responsible for the lethal wilt disease of cacao (Theobroma cacao L.). Marker-assisted selection combined with conventional breeding is one powerful approach to improve cacao resistance to Ceratocystis wilt.
Clément, Didier, Santos Lima, Livia, Pires, José Luis, Lopes, Uilson Vanderlei, Gramacho, Karina Peres, Micheli, Fabienne, Lanaud, Claire, Legravre, Thierry, Schnell, Raymond J., Ferreira Santos, Rogério Mercês   +9 more
core   +1 more source

Development of a panel of unigene-derived polymorphic EST–SSR markers in lentil using public database information

Crop Journal, 2016
Lentil (Lens culinaris Medik.), a diploid (2n = 14) with a genome size greater than 4000 Mbp, is an important cool season food legume grown worldwide. The availability of genomic resources is limited in this crop species.
Debjyoti Sen Gupta, Peng Cheng, Gaurav Sablok, Dil Thavarajah, Pushparajah Thavarajah, Clarice J. Coyne, Shiv Kumar, Michael Baum, Rebecca J. McGee   +8 more
doaj   +1 more source

Identification of wheat cultivars using EST-SSR markers

Breeding Science, 2009
The recent amendment of the Plant Variety Protection Law in Japan has extended plant breeders’ rights to cover the harvested materials and manufactured products from a cultivar. The Government Quality Labeling Standards require proper food labeling, which includes cultivar names if they appear on the product label.
Fujita, Yumiko, Fukuoka, Hiroyuki, Yano, Hiroshi   +2 more
openaire   +2 more sources

Nonrandom distribution and frequencies of genomic and EST-derived microsatellite markers in rice, wheat, and barley

BMC Genomics, 2005
Background Earlier comparative maps between the genomes of rice (Oryza sativa L.), barley (Hordeum vulgare L.) and wheat (Triticum aestivum L.) were linkage maps based on cDNA-RFLP markers.
Yu Ju-Kyung, Kantety Ramesh V, La Rota Mauricio, Sorrells Mark E   +3 more
doaj   +1 more source

Utility of EST-Derived SSRs as Population Genetics Markers in a Beetle [PDF]

, 2008
Microsatellite, or simple sequence repeat (SSR), loci can be identified by mining expressed sequence tag (EST) databases, and where these are available, marker development time and expense can be decreased considerably over conventional strategies of ...
Thomas, Sappington, Thomas, Kyung Seok Kim, Kim, Kyung, Lei Liu, B. Wade French, W. Sappington, Ratcliffe, Susan, Susan T. Ratcliffe, French, B. Wade, Liu, Lei   +10 more
core  

Development of novel genic microsatellite markers from transcriptome sequencing in sugar maple (Acer saccharum Marsh.)

BMC Research Notes, 2017
Background Sugar maple (Acer saccharum Marsh.) is a hardwood tree species native to northeastern North America and economically valued for its wood and sap. Yet, few molecular genetic resources have been developed for this species to date. Microsatellite
Monica Harmon, Thomas Lane, Margaret Staton, Mark V. Coggeshall, Teodora Best, Chien-Chih Chen, Haiying Liang, Nicole Zembower, Daniela I. Drautz-Moses, Yap Zhei Hwee, Stephan C. Schuster, Scott E. Schlarbaum, John E. Carlson, Oliver Gailing   +13 more
doaj   +1 more source

Mining expressed sequence tag (EST) microsatellite markers to assess the genetic differentiation of five Hynobius species endemic to Taiwan

Scientific Reports
Taiwan harbors five endemic species of salamanders (Hynobius spp.) that inhabit distinct alpine regions, contributing to population fragmentation across isolated “sky islands”.
Jou-An Chen, Pei-Ju Yu, Sheng-Wun Jheng, You-Zhu Lin, Pei-Wei Sun, Wen-Ya Ko, Chun-Fu Lin, Yu-Ten Ju   +7 more
doaj   +1 more source