Feature selection and survival modeling in The Cancer Genome Atlas
Hyunsoo Kim,1 Markus Bredel2 1Department of Pathology, The University of Alabama at Birmingham, Birmingham, AL, USA; 2Department of Radiation Oncology, and Comprehensive Cancer Center, The University of Alabama at Birmingham, Birmingham, AL, USA Purpose:
Kim H, Bredel M
doaj
Bayesian Penalized Method for Streaming Feature Selection
The online feature selection with streaming features has become more and more important in recent years. In contrast to standard feature selection method, streaming feature selection method can select feature dynamically without exploring full feature ...
Xiao-Ting Wang, Xin-Ze Luan
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Clustering based feature selection using Partitioning Around Medoids (PAM)
High-dimensional data contains a large number of features. With many features, high dimensional data requires immense computational resources, including space and time.
Dewi Pramudi Ismi, Murinto Murinto
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The Saccharomyces cerevisiae amino acid transporter Lyp1 has a broad substrate spectrum
In Saccharomyces cerevisiae, Yeast Amino acid Transporter family members mediate the import of amino acids, ranging from substrate specialists to generalists. Here, we show that the specialist transporter, Lyp1, has a broader substrate spectrum than previously described, with affinity constants spanning from micromolar to millimolar.
Foteini Karapanagioti+3 more
wiley +1 more source
On Two-Stage Feature Selection Methods for Text Classification
Text classification is a high dimensional pattern recognition problem where feature selection is an important step. Although researchers still propose new feature selection methods, there exist many two-stage feature selection methods combining existing ...
Alper Kursat Uysal
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Subspace Learning for Feature Selection via Rank Revealing QR Factorization: Unsupervised and Hybrid Approaches with Non-negative Matrix Factorization and Evolutionary Algorithm [PDF]
The selection of most informative and discriminative features from high-dimensional data has been noticed as an important topic in machine learning and data engineering. Using matrix factorization-based techniques such as nonnegative matrix factorization for feature selection has emerged as a hot topic in feature selection.
arxiv
Urine is a rich source of biomarkers for cancer detection. Tumor‐derived material is released into the bloodstream and transported to the urine. Urine can easily be collected from individuals, allowing non‐invasive cancer detection. This review discusses the rationale behind urine‐based cancer detection and its potential for cancer diagnostics ...
Birgit M. M. Wever+1 more
wiley +1 more source
Stability of feature selection algorithm: A review
Feature selection technique is a knowledge discovery tool which provides an understanding of the problem through the analysis of the most relevant features.
Utkarsh Mahadeo Khaire, R. Dhanalakshmi
doaj
Subpar reporting of pre‐analytical variables in RNA‐focused blood plasma studies
Pre‐analytical variables strongly influence the analysis of extracellular RNA (cell‐free RNA; exRNA) derived from blood plasma. Their reporting is essential to allow interpretation and replication of results. By evaluating 200 exRNA studies, we pinpoint a lack of reporting pre‐analytical variables associated with blood collection, plasma preparation ...
Céleste Van Der Schueren+16 more
wiley +1 more source
Surfaceome: a new era in the discovery of immune evasion mechanisms of circulating tumor cells
In the era of immunotherapies, many patients either do not respond or eventually develop resistance. We propose to pave the way for proteomic analysis of surface‐expressed proteins called surfaceome, of circulating tumor cells. This approach seeks to identify immune evasion mechanisms and discover potential therapeutic targets. Circulating tumor cells (
Doryan Masmoudi+3 more
wiley +1 more source