Results 41 to 50 of about 211,756 (347)
Bio-Protocol, 2012 The KMnO4 footprinting method offers a rapid and easy way to detect and localize single-stranded regions within a duplex DNA molecule, such as it occurs for instance within an actively transcribing RNA polymerase-DNA complex or during R-loop formation in
Ümit Pul, Reinhild Wurm, Rolf Wagner
doaj +1 more source
A Ribosome Footprinting Protocol for Plants
Bio-Protocol, 2016 Ribosome footprinting, or Ribo-seq, has revolutionized the studies of translation. It was originally developed for yeast and mammalian cells in culture (Ingolia et al., 2009).
Catharina Merchante +4 more
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A fast algorithm for the construction of universal footprinting templates in DNA
, 2005 We introduce and give a complete description of a new graph to be used for DNA sequencing questions. This graph has the advantage over the classical de Bruijn graph that it fully accounts for the double stranded nature of DNA, rather than dealing with ...
James W. Anderson +5 more
core +1 more source
Illuminating Biological Interactions with in Vivo Protein Footprinting
Analytical Chemistry, 2019 Protein footprinting coupled with mass spectrometry is being increasingly used for the study of protein interactions and conformations. The hydroxyl radical footprinting method, fast photochemical oxidation of proteins (FPOP), utilizes hydroxyl radicals ...
Jessica A. Espino, L. Jones
semanticscholar +1 more source
Long-Range and Highly Sensitive DNase I Footprinting by an Automated Infrared DNA Sequencer
BioTechniques, 1997 We have shown that an automated DNA sequencer is applicable to fluorescencebased detection of fragments in DNase I footprinting. We demonstrated the potential of long-range and highly sensitive DNase I footprinting taking advantage of an infrared ...
Masayuki Machida +2 more
doaj +1 more source
Footprints of coagulopathy [PDF]
Journal of Neurology, Neurosurgery & Psychiatry, 2002 A 68 year old man with chronic atrial fibrillation and a St Jude valve in mitral position discontinued warfarin several days prior to a coronary angiogram. Forty eight hours after restarting his warfarin, while also on low molecular weight …
R D, Ecker, E F M, Wijdicks
openaire +2 more sources
Carbocation Footprinting of Soluble and Transmembrane Proteins
, 2021 Here, we introduce carbocations (R3C+) as laser-initiated footprinting reagents for proteins. We screened seven candidates and selected trifluomethoxy benzyl bromide (TFBB) as an effective precursor for the electrophilic trifluomethoxy benzyl ...
Shuang Li (146392) +3 more
core +1 more source
Geophysical Research Letters, 2018 This study finds the seasonal footprinting (SF) mechanism to be a key source of El Niño–Southern Oscillation (ENSO) complexity, whereas the charged‐discharged (CD) mechanism acts to reduce complexity. The CD mechanism forces El Niño and La Niña to follow
Jin-Yi Yu, S. Fang
semanticscholar +1 more source
BigFoot: Bayesian alignment and phylogenetic footprinting with MCMC
BMC Evolutionary Biology, 2009 Background We have previously combined statistical alignment and phylogenetic footprinting to detect conserved functional elements without assuming a fixed alignment.
Miklós István +4 more
doaj +1 more source
, 2009 Footprinting is a method for determining the sequence selectivity of DNA-binding compounds in which ligands protect DNA from cleavage at their binding sites.
Fox, Keith R. +3 more
core +1 more source