Meeting report:Fungal genomics meets social media: Highlights of the 28th fungal genetics conference at asilomar [PDF]
, 2015 International ...
Alexander, William G. +10 more
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TheiaEuk: a species-agnostic bioinformatics workflow for fungal genomic characterization
Frontiers in Public Health, 2023 IntroductionThe clinical incidence of antimicrobial-resistant fungal infections has dramatically increased in recent years. Certain fungal pathogens colonize various body cavities, leading to life-threatening bloodstream infections.
Frank J. Ambrosio +18 more
doaj +1 more source
Genome Sequence of the Chestnut Blight Fungus Cryphonectria parasitica EP155: A Fundamental Resource for an Archetypical Invasive Plant Pathogen. [PDF]
, 2020 Cryphonectria parasitica is the causal agent of chestnut blight, a fungal disease that almost entirely eliminated mature American chestnut from North America over a 50-year period. Here, we formally report the genome of C. parasitica EP155 using a Sanger
Aerts, Andrea +14 more
core
Fungal Endophytes of Populus trichocarpa Alter Host Phenotype, Gene Expression, and Rhizobiome Composition. [PDF]
, 2019 Mortierella and Ilyonectria genera include common species of soil fungi that are frequently detected as root endophytes in many plants, including Populus spp.
Bonito, Gregory +10 more
core +2 more sources
PLoS Genetics, 2016 Transposable elements (TEs) are exceptional contributors to eukaryotic genome diversity. Their ubiquitous presence impacts the genomes of nearly all species and mediates genome evolution by causing mutations and chromosomal rearrangements and by ...
Raúl Castanera +11 more
semanticscholar +1 more source
Genome-scale phylogeny and contrasting modes of genome evolution in the fungal phylum Ascomycota
Science Advances, 2020 The 1107 genomes yield a robust phylogenomic timetree and reveal contrasting modes of evolution in the largest fungal phylum. Ascomycota, the largest and most well-studied phylum of fungi, contains three subphyla: Saccharomycotina (budding yeasts ...
Xing‐Xing Shen +9 more
semanticscholar +1 more source
Genomic and Genetic Insights Into a Cosmopolitan Fungus, Paecilomyces variotii (Eurotiales)
Frontiers in Microbiology, 2018 Species in the genus Paecilomyces, a member of the fungal order Eurotiales, are ubiquitous in nature and impact a variety of human endeavors. Here, the biology of one common species, Paecilomyces variotii, was explored using genomics and functional ...
Andrew S. Urquhart +13 more
doaj +1 more source
Functional Profiling of Transcription Factor Genes in Neurospora crassa. [PDF]
, 2017 Regulation of gene expression by DNA-binding transcription factors is essential for proper control of growth and development in all organisms. In this study, we annotate and characterize growth and developmental phenotypes for transcription factor genes ...
Bekman, Thomas +17 more
core +1 more source
Dancing genomes: fungal nuclear positioning [PDF]
Nature Reviews Microbiology, 2009 The many different mechanisms that fungi use to transmit and share genetic material are mediated by a broad range of chromosome and nuclear dynamics. The mechanics underlying nuclear migration are well integrated into detailed models, in which the forces supplied by plus- and minus-end-directed microtubule motors position and move the nucleus in a cell.
Amy, Gladfelter, Judith, Berman
openaire +2 more sources
Fungal Genomic Annotation [PDF]
, 2006 Sequencing technology in the last decade has advanced at an incredible pace. Currently there are hundreds of microbial genomes available with more still to come. Automated genome annotation aims to analyze this amount of sequence data in a high-throughput fashion and help researches to understand the biology of these organisms.
Igor V. Grigoriev +2 more
openaire +3 more sources