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Deciphering gene expression regulatory networks

Current Opinion in Genetics & Development, 2002
In the past year, great strides have been made in our understanding of the regulatory networks that control gene expression in the model eukaryote Saccharomyces cerevisiae. The development and use of a number of genomic tools, including genome-wide location and expression analysis, has fueled this progress.
John J, Wyrick, Richard A, Young
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Gene Regulatory Networks

2007
Two gene regulatory networks inferred from different types of data are considered in this chapter. Gene expression networks are networks inferred from microarray time series data and transcription factor networks are networks obtained from a new genome-wide technique that allows an identification of all of the DNA binding sites for each transcription ...
T. Gregory Dewey, David J. Galas
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WITHDRAWN: Evolving gene regulatory networks

Biosystems, 2009
The Publisher regrets that this article is an accidental duplication of an article that has already been published, http://dx.doi.org/10.1016/j.biosystems.2009.10.001. The duplicate article has therefore been withdrawn. The full Elsevier Policy on Article Withdrawal can be found at http://www.elsevier.com/locate/withdrawalpolicy.
Yaochu, Jin, Jennifer, Hallinan
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Semi-synthetic mammalian gene regulatory networks

Metabolic Engineering, 2005
In recent years gene network engineers have celebrated spectacular success: Genetic devices such as epigenetic toggle switches and oscillating networks have been engineered and pioneered a new ever-increasing scientific community known as synthetic biology.
Beat P, Kramer   +2 more
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Gene Regulatory Networks

2019
Gene regulatory networks: methods and protocols , Gene regulatory networks: methods and protocols , کتابخانه‌های دانشگاه ...
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The gene regulatory network

Proceedings of the 10th annual conference on Genetic and evolutionary computation, 2008
This paper proposes a new approach for biologically inspired computing on the basis of Gene Regulatory Networks. These networks are models of genes and dynamic interactions that take place between them. The differential equation representations of such networks resemble neural networks as well as idiotypic networks in immune system.
Sanjoy Das   +4 more
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Estimation of Gene Regulatory Networks

Postdoc Journal, 2013
Complex gene regulatory networks, not individual genes, control cellular function. Genes and gene products act together to determine cellular phenotypes. Estimation of these networks is necessary to understand cellular mechanisms, detect differences in gene regulation between cell types, and predict cellular response to interventions.
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Gene Regulatory Network Inference

2021
Transcriptomic data quantifying gene expression states for single cells or cell populations at a genomic level is now readily available. Changes in transcriptional state during cell development and function are governed by gene regulatory networks, comprising a collection of genes and regulatory interactions between these genes (or gene products ...
Babtie, AC, Stumpf, MPH, Thorne, T
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