Results 31 to 40 of about 1,096,010 (335)

The remarkable chloroplast genome of dinoflagellates [PDF]

Journal of Experimental Botany, 2008
Dinoflagellates are an economically and ecologically important eukaryotic algal group. The organization of their chloroplast genome appears to be radically different from that in plants and other algae. The gene content has been dramatically reduced in dinoflagellates, with the large-scale transfer of genes to the nucleus.
Adrian C. Barbrook, R. Ellen R. Nisbet, Christopher J. Howe   +2 more
openaire   +4 more sources

ChloroplastDB: the Chloroplast Genome Database [PDF]

Nucleic Acids Research, 2006
The Chloroplast Genome Database (ChloroplastDB) is an interactive, web-based database for fully sequenced plastid genomes, containing genomic, protein, DNA and RNA sequences, gene locations, RNA-editing sites, putative protein families and alignments (http://chloroplast.cbio.psu.edu/).
Narayanan Veeraraghavan, Izabela Makalowska, Jim Leebens-Mack, Liying Cui, Robert K. Jansen, P. Kerr Wall, Alexander Richter, Claude W. dePamphilis   +7 more
openaire   +2 more sources

Characterization of the complete chloroplast genome of Populus deltoides Zhonglin 2025

Mitochondrial DNA. Part B. Resources, 2020
The complete chloroplast genome of Populus deltoides was characterized by reference-based assembly using whole-genome sequencing data. The total chloroplast genome size of Populus deltoides included a pair of inverted repeat regions (IRs) of 27,649 bp ...
Weibing Zhuang, Xiaochun Shu, Ming Zhang, Tao Wang, Fengjiao Zhang, Ning Wang, Zhong Wang   +6 more
doaj   +1 more source

Organellar inheritance in the green lineage: insights from Ostreococcus tauri [PDF]

, 2013
Along the green lineage (Chlorophyta and Streptophyta), mitochondria and chloroplast are mainly uniparentally transmitted and their evolution is thus clonal. The mode of organellar inheritance in their ancestor is less certain.
Adam Eyre-Walker, Baur, Birky, Bonen, Boynton, Bruen, Correns, De Clerck, Derelle, Duret, Grimsley, Guindon, Gwenael Piganeau, Hasegawa, Hill, Hill, Houliston, Hua, Huang, Hurst, Hutson, Jancek, Kurtz, Larkin, Lewis, Lewontin, Li, MacAlpine, Marin, Marshall, Maréchal, Maynard Smith, McVean, Miyamura, Muller, Nei, Ness, Olson, Piganeau, Posada, Posada, R Development Core Team, Robbens, Rodríguez-Ezpeleta, Romain Blanc-Mathieu, Sager, Sager, Sager, Simpson, Sophie Sanchez-Ferandin, Städler, Sun, Sung, Swofford, Tamura, Tamura, Tsai   +56 more
core   +1 more source

Chloroplast genome variation and phylogenetic relationships of Atractylodes species

BMC Genomics, 2020
Atractylodes DC is the basic original plant of the widely used herbal medicines “Baizhu” and “Cangzhu” and an endemic genus in East Asia. Species within the genus have minor morphological differences, and the universal DNA barcodes cannot clearly ...
Yiheng Wang, Sheng Wang, Yanlei Liu, Qingjun Yuan, Jiahui Sun, Lanping Guo   +5 more
semanticscholar   +1 more source

Origins of the amphiploid species Brassica napus L. investigated by chloroplast and nuclear molecular markers [PDF]

, 2010
Background: The amphiploid species Brassica napus (oilseed rape, Canola) is a globally important oil crop yielding food, biofuels and industrial compounds such as lubricants and surfactants.
Allender, Charlotte J., King , Graham J.
core   +4 more sources

The Complete Chloroplast Genome Sequences of 14 Curcuma Species: Insights Into Genome Evolution and Phylogenetic Relationships Within Zingiberales

Frontiers in Genetics, 2020
Zingiberaceae is taxonomically complex family where species are perennial herb. However, lack of chloroplast genomic information severely hinders our understanding of Zingiberaceae species in the research of evolution and phylogenetic relationships.
Heng Liang, Yan Zhang, Jia-bin Deng, G. Gao, C. Ding, Li Zhang, Ruiwu Yang   +6 more
semanticscholar   +1 more source

Comparative Chloroplast Genomics in Phyllanthaceae Species [PDF]

Diversity, 2021
Family Phyllanthaceae belongs to the eudicot order Malpighiales, and its species are herbs, shrubs, and trees that are mostly distributed in tropical regions. Here, we elucidate the molecular evolution of the chloroplast genome in Phyllanthaceae and identify the polymorphic loci for phylogenetic inference.
Umar Rehman, Nighat Sultana, null Abdullah, Abbas Jamal, Maryam Muzaffar, Peter Poczai   +5 more
openaire   +4 more sources

Phylogenomic Analysis and Dynamic Evolution of Chloroplast Genomes in Salicaceae

Frontiers in Plant Science, 2017
Chloroplast genomes of plants are highly conserved in both gene order and gene content. Analysis of the whole chloroplast genome is known to provide much more informative DNA sites and thus generates high resolution for plant phylogenies. Here, we report
Yuan Huang, Yuan Huang, Jun Wang, Yongping Yang, Chuanzhu Fan, Jiahui Chen, Jiahui Chen   +6 more
doaj   +1 more source

The use of chloroplast genome sequences to solve phylogenetic incongruences in Polystachya Hook (Orchidaceae Juss) [PDF]

, 2018
Background: Current evidence suggests that for more robust estimates of species tree and divergence times, several unlinked genes are required. However, most phylogenetic trees for non-model organisms are based on single sequences or just a few regions ...
Acosta, Barros, Bräutigam, Capella-Gutiérrez, Carstens, Chang, Christenhusz, Cribb, Cronn, Dressler, Dressler, Eaton, Edwards, Freudenstein, Gustafsson, Górniak, Joly, Kamneva, Katoh, Kelchner, Kelchner, Kim, Kraenzlin, Lemmon, Lemmon, Li, Li, Luo, Mamanova, Marshall, McCormack, Michel, Mort, Mytnik-Ejsmont, Parks, Peraza-Flores, Pfeil, Rambaut, Rambaut, Ramírez, Ramírez, Ronquist, Rupp, Russell, Russell, Russell, Shaw, Shaw, Shaw, Small, Smith, Sousa, Steel, Stephens, Summerhayes, Summerhayes, Särkinen, Toor, Tsitrone, Van den Berg, Weitemier   +60 more
core   +2 more sources