Phylogeny of Prokaryotes and Chloroplasts Revealed by a Simple Composition Approach on All Protein Sequences from Complete Genomes Without Sequence Alignment [PDF]
, 2005 The complete genomes of living organisms have provided much information on their phylogenetic relationships. Similarly, the complete genomes of chloroplasts have helped to resolve the evolution of this organelle in photosynthetic eukaryotes.
C Lemieux +50 more
core +3 more sources
Comparative chloroplast genome analyses of Avena: insights into evolutionary dynamics and phylogeny
BMC Plant Biology, 2020 Oat (Avena sativa L.) is a recognized health-food, and the contributions of its different candidate A-genome progenitor species remain inconclusive.
Qing Liu +5 more
semanticscholar +1 more source
Genes Translocated into the Plastid Inverted Repeat Show Decelerated Substitution Rates and Elevated GC Content. [PDF]
, 2016 Plant chloroplast genomes (plastomes) are characterized by an inverted repeat (IR) region and two larger single copy (SC) regions. Patterns of molecular evolution in the IR and SC regions differ, most notably by a reduced rate of nucleotide substitution ...
Kuo, Li-Yaung +3 more
core +1 more source
Evolutionary and phylogenetic aspects of the chloroplast genome of Chaenomeles species
Scientific Reports, 2020 Chaenomeles (family Rosaceae) is a genus of five diploid species of deciduous spiny shrubs that are native to Central Asia and Japan. It is an important horticultural crop (commonly known as flowering quinces) in Europe and Asia for its high yield in ...
Jiahui Sun +6 more
semanticscholar +1 more source
Third-codon transversion rate-based _Nymphaea_ basal angiosperm phylogeny -- concordance with developmental evidence [PDF]
, 2007 Flowering plants (angiosperms) appeared on Earth rather suddenly approximately 130 million years ago and underwent a massive expansion in the subsequent 10-12 million years.
(Max) Zong-Ming Cheng +4 more
core +2 more sources
The complete chloroplast genome sequence of Camellias (Camellia fangchengensis)
Mitochondrial DNA. Part B. Resources, 2018 Camellia fangchengensis is endemic to Fangcheng, Guangxi Province, China, and its populations have been shrinking. In the present study, we report the complete chloroplast genome of C. fangchengensis using HiSeq 2500 sequencing technology.
Yuan Liu, Yan Han
doaj +1 more source
Plant genetic reseources: effective utilization [PDF]
, 2010 Characterizing better understanding the genome organization and differentiating identity of genotypes based on their morphology and genome characteristics are vital determinants in their commercialization, management of germplasm repositories, and ...
Budak, Hikmet
core +1 more source
The complete chloroplast genome sequence of the medicinal plant Sophora tonkinensis
Scientific Reports, 2020 Sophora tonkinensis belongs to genus Sophora of the Fabaceae family. It is mainly distributed in the ridge and peak regions of limestone areas in western China and has high medicinal value and important ecological functions.
Fan Wei +9 more
semanticscholar +1 more source
Scientific Reports, 2017 The chloroplast genome originated from photosynthetic organisms and has retained the core genes that mainly encode components of photosynthesis. However, the causes of variations in chloroplast genome size in seed plants have only been thoroughly ...
Zheng Xiao-Ming +11 more
doaj +1 more source
Mitochondrial DNA. Part B. Resources, 2021 Peach (Prunus persica) is one of the most important economic fruit crops in the current society. In this study, we reported the complete chloroplast genome sequence of peach cultivar ‘Rui Guang 18’ (Prunus persica var. nectarina cv. ‘Rui Guang 18’) using
Liu Xin +5 more
doaj +1 more source