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2019
Genome assembly refers to the process of taking a large number of short DNA sequences and putting them back together to create a representation of the original chromosomes from which the DNA originated. For assembling neem genome, we filtered the NGS raw reads from Illumina to get high-quality reads followed by assembly using Velvet assembler.
Nagesh A. Kuravadi, Malali Gowda
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Genome assembly refers to the process of taking a large number of short DNA sequences and putting them back together to create a representation of the original chromosomes from which the DNA originated. For assembling neem genome, we filtered the NGS raw reads from Illumina to get high-quality reads followed by assembly using Velvet assembler.
Nagesh A. Kuravadi, Malali Gowda
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NextPolish: a fast and efficient genome polishing tool for long-read assembly
Bioinform., 2019MOTIVATION While long-read sequencing technologies can produce genomes with long contiguity, they suffer from high error rates. Thus, we developed NextPolish, a tool that efficiently corrects sequence errors in genomes assembled with long reads. This new
Jiang Hu +3 more
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Genome assembly and genetic dissection of a prominent drought-resistant maize germplasm
Nature Genetics, 2023Tian Tian +10 more
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Genome Assembly, Rearrangement, and Repeats
Chemical Reviews, 2007AbstractChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 200 leading journals. To access a ChemInform Abstract, please click on HTML or PDF.
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Particle Assembly and Genome Packaging
2003Foamy virus (FV) replication is distinct from that of all other retroviruses in many respects, including viral assembly. In fact, the viral assembly pathway is rather similar to that of hepadnaviruses such as hepatitis B virus. Foamy virus Gag does not contain landmark retroviral assembly domains such as the major homology region, Cys-His boxes, or a ...
M L, Linial, S W, Eastman
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Multiplex de Bruijn graphs enable genome assembly from long, high-fidelity reads
Nature Biotechnology, 2022A. Bankevich +4 more
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BUSCO: Assessing Genome Assembly and Annotation Completeness.
Methods in molecular biology, 2019M. Seppey, M. Manni, E. Zdobnov
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