Results 41 to 50 of about 141,521 (289)
On central max-point-tolerance graphs
AKCE International Journal of Graphs and Combinatorics, 2020 Max-point-tolerance graphs (MPTG) were studied by Catanzaro et al. in 2017 and the same class of graphs were introduced in the name of p-BOX(1) graphs by Soto and Caro in 2015.
Sanchita Paul
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MoMI-G: modular multi-scale integrated genome graph browser
BMC Bioinformatics, 2019 Background Genome graph is an emerging approach for representing structural variants on genomes with branches. For example, representing structural variants of cancer genomes as a genome graph is more natural than representing such genomes as differences
Toshiyuki T. Yokoyama +4 more
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Visualizing Gene Clusters using Neighborhood Graphs in R [PDF]
, 2008 The visualization of cluster solutions in gene expression data analysis gives practitioners an understanding of the cluster structure of their data and makes it easier to interpret the cluster results.
Leisch, Friedrich, Scharl, Theresa
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Pan-genome de Bruijn graph using the bidirectional FM-index
BMC Bioinformatics, 2023 Background Pan-genome graphs are gaining importance in the field of bioinformatics as data structures to represent and jointly analyze multiple genomes. Compacted de Bruijn graphs are inherently suited for this purpose, as their graph topology naturally ...
Lore Depuydt +3 more
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Comparing methods for constructing and representing human pangenome graphs
Genome Biology, 2023 Background As a single reference genome cannot possibly represent all the variation present across human individuals, pangenome graphs have been introduced to incorporate population diversity within a wide range of genomic analyses.
Francesco Andreace +3 more
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Genome Sequence of Stenotrophomonas maltophilia PML168, Which Displays Baeyer-Villiger Monooxygenase Activity [PDF]
, 2012 Stenotrophomonas maltophilia PML168 was isolated from Wembury Beach on the English Coast from a rock pool following growth and selection on agar plates.
Muhling, M +23 more
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Draft Genome Sequences of Strains of Pasteurella multocida Isolated from the United Kingdom and the United States [PDF]
, 2013 Pasteurella multocida is a major pathogen of farm animals and has worldwide distribution. Here we report the draft genome sequences of four strains that were isolated from animals in the United Kingdom and the United States and represent pathogenic and ...
Mark P. Dagleish +9 more
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On the similarity of sets of permutations and its applications to genome comparison [PDF]
, 2003 Bergeron A, Stoye J. On the similarity of sets of permutations and its applications to genome comparison. In: Proc. of COCOON 2003. LNCS. Vol 2697.
Jens Stoye +3 more
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Examining bacterial variation with genome graphs and Nanopore sequencing [PDF]
, 2022 A bacterial species' genetic content can be remarkably fluid. The collection of genes found within a given species is called the pan-genome and is generally much larger than the gene repertoire of a single cell.
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Enabling graph appliance for genome assembly
2015 IEEE International Conference on Big Data (Big Data), 2015 In recent years, there has been a huge growth in the amount of genomic data available as reads generated from various genome sequencers. The number of reads generated can be huge, ranging from hundreds to billions of nucleotide, each varying in size.
Rina Singh +4 more
openaire +2 more sources