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The application of pangenomics and machine learning in genomic selection in plants
The Plant Genome, 2021Genomic selection approaches have increased the speed of plant breeding, leading to growing crop yields over the last decade. However, climate change is impacting current and future yields, resulting in the need to further accelerate breeding efforts to ...
P. Bayer +5 more
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Inbreeding in genome‐wide selection [PDF]
Journal of Animal Breeding and Genetics, 2007 SummaryTraditional selection methods, such as sib and best linear unbiased prediction (BLUP) selection, which increased genetic gain by increasing accuracy of evaluation have also led to an increased rate of inbreeding per generation (ΔFG). This is not necessarily the case with genome‐wide selection, which also increases genetic gain by increasing ...
Daetwyler, H.D. +3 more
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Correlational selection in the age of genomics
Nature Ecology & Evolution, 2021Ecologists and evolutionary biologists are well aware that natural and sexual selection do not operate on traits in isolation, but instead act on combinations of traits. This long-recognized and pervasive phenomenon is known as multivariate selection, or-in the particular case where it favours correlations between interacting traits-correlational ...
Anna Runemark +15 more
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Genomic selection and its application
Hereditas (Beijing), 2011Selective breeding is very important in agricultural production and breeding value estimation is the core of selective breeding. With the development of genetic markers, especially high throughput genotyping technology, it becomes available to estimate breeding value at genome level, i.e. genomic selection (GS).
Hengde Li, Xiao-Wen Sun, Zhen-Min Bao
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Genomic insights into positive selection [PDF]
Trends in Genetics, 2006 The traditional way of identifying targets of adaptive evolution has been to study a few loci that one hypothesizes a priori to have been under selection. This approach is complicated because of the confounding effects that population demographic history and selection have on patterns of DNA sequence variation.
Shameek Biswas, Joshua M. Akey
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Genomic selection in hybrid breeding [PDF]
Plant Breeding, 2014 AbstractWhile hybrid breeding is widely applied in outbreeding species, for many self‐pollinating crop plants, it has only recently been established. This may have had its reason in the limitations of methods available for hybrid performance prediction, in particular when established heterotic pools were absent.
Michael Florian Mette +2 more
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Selection and Adaptation in the Human Genome
Annual Review of Genomics and Human Genetics, 2013An enduring goal of evolutionary biology is to understand how natural selection has shaped patterns of polymorphism and divergence within and between species and to map the genetic basis of adaptations. The rapid maturation of next-generation sequencing technology has generated a deluge of genomics data from nonhuman primates, extinct hominins, and ...
Joshua M. Akey, Wenqing Fu
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Genomic selection and genetic architecture of agronomic traits during modern rapeseed breeding
Nature Genetics, 2022Jihong Hu +22 more
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