AI‐Driven Cancer Multi‐Omics: A Review From the Data Pipeline Perspective
The exponential growth of cancer multi‐omics data brings opportunities and challenges for precision oncology. This review systematically examines AI's role in addressing these challenges, covering generative models, integration architectures, Explainable AI for clinical trust, clinical applications, and key directions for clinical translation.
Shilong Liu, Shunxiang Li, Kun Qian
wiley +1 more source
Representing Born effective charges with equivariant graph convolutional neural networks. [PDF]
Kutana A +3 more
europepmc +1 more source
Classification of Cancer Types Using Graph Convolutional Neural Networks. [PDF]
Ramirez R +7 more
europepmc +1 more source
AS‐pHopt: An Optimal pH Prediction Model Enhanced by Active Site of Enzymes
To address the low accuracy of enzyme optimal pH (pHopt) prediction, this study develops active site‐based pHopt (AS‐pHopt), a prediction model enhanced by active site information and pseudo‐label prediction. Integrating key structural and physicochemical features affecting enzyme pHopt, AS‐pHopt uses Evolutionary Scale Modeling (ESM)‐2 with active ...
Wenxiang Song +6 more
wiley +1 more source
MVHGCN: Predicting circRNA-disease associations with multi-view heterogeneous graph convolutional neural networks. [PDF]
Miao Y +5 more
europepmc +1 more source
We report a novel interpretation method for deep learning models based on feature extraction and clustering. Applying this method to an atomistic line graph neural network (ALIGNN) model trained on optical absorption spectra of 2,681 inorganic compounds obtained from first‐principles calculations, we successfully identify key factors underlying ...
Akira Takahashi +3 more
wiley +1 more source
Enhanced Simulation of Complicated MXene Materials with Graph Convolutional Neural Networks. [PDF]
Chen X, Wan Z, Lao S, Tian Z.
europepmc +1 more source
AI‐BioMech is a deep learning framework that predicts the mechanical behavior of biological cellular materials directly from 2D images. By replacing traditional finite element analysis with semantic segmentation, it identifies stress and strain distributions with 99% accuracy, offering a high‐speed, scalable alternative for analyzing complex, aperiodic
Haleema Sadia +2 more
wiley +1 more source
Graph convolutional neural networks improved target-specific scoring functions for cGAS and kRAS in virtual screening. [PDF]
Wang B, Junaid M, Li W.
europepmc +1 more source
Estimating Tissue Microstructure with Undersampled Diffusion Data via Graph Convolutional Neural Networks. [PDF]
Chen G +9 more
europepmc +1 more source

