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The phased pan-genome of tetraploid European potato. [PDF]

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Sun H   +15 more
europepmc   +1 more source

Protists Exhibit Stronger and More Recent Oceanic Genetic Structure than Archaeplastida and Metazoa

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González-Miguéns R   +5 more
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Haplotype Inference Constrained by Plausible Haplotype Data

IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2009
The haplotype inference problem (HIP) asks to find a set of haplotypes which resolve a given set of genotypes. This problem is important in practical fields such as the investigation of diseases or other types of genetic mutations. In order to find the haplotypes which are as close as possible to the real set of haplotypes that comprise the genotypes ...
Frances A. Rosamond   +5 more
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Ancestral haplotypes: conserved population MHC haplotypes

Human Immunology, 1992
We describe here a number of Caucasoid MHC haplotypes that extend from HLA-B to DR and that have been conserved en bloc. These haplotypes and recombinants between any two of them account for 73% of unselected haplotypes in our Caucasoid population. The existence of ancestral haplotypes implies conservation of large chromosomal segments. Irrespective of
Campbell S. Witt   +5 more
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An Algorithm for Haplotype Analysis

Journal of Computational Biology, 1997
This paper proposes an algorithm for haplotype analysis based on a Monte Carlo method. Haplotype configurations are generated according to the distribution of joint haplotypes of individuals in a pedigree given their phenotype data, via a Markov chain Monte Carlo algorithm.
Terence P. Speed, Shili Lin
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Haplotype Inference

2011
Haplotypes, as they specify linkage patterns between individual nucleotide variants, confer critical information for understanding the genetics of human diseases. However, haplotype information is not directly obtainable from high-throughput genotyping platforms.
Xin, Li, Jing, Li
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