Results 241 to 250 of about 174,485 (267)

HPC-based genome variant calling workflow (HPC-GVCW)

2023
AbstractA high-performance computing genome variant calling workflow was designed to run GATK on HPC platforms. This workflow efficiently called an average of 27.3 M, 32.6 M, 168.9 M, and 16.2 M SNPs for rice, sorghum, maize, and soybean, respectively, on the most recently released high-quality reference sequences.
Yong Zhou, Nagarajan Kathiresan, Zhichao Yu, Luis F. Rivera, Manjula Thimma, Keerthana Manickam, Dmytro Chebotarov, Ramil Mauleon, Kapeel Chougule, Sharon Wei, Tingting Gao, Carl D. Green, Andrea Zuccolo, Doreen Ware, Jianwei Zhang, Kenneth L. McNally, Rod A. Wing   +16 more
openaire   +1 more source

Securing HPC

Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis, 2017
Multi-factor authentication (MFA) is rapidly becoming the de facto standard for access to all computing, whether via web, phone, or direct command-line access. HPC centers and other institutions supporting hundreds or thousands of users face challenging cost, licensing, user support, and infrastructure deployment decisions when considering a transition
W. Cyrus Proctor, Patrick Storm, Matthew R. Hanlon, Nathaniel Mendoza   +3 more
openaire   +1 more source

HPC Monitoring

Presentation on HPC Monitoring and its corresponding Glossary, created and presented by Sara Díaz Ortega at the Workshop "System Administration for HPC", Supervised by Christian Bustelo Yáñez, organized under BioNT by Do IT Now 
Díaz Ortega, Sara, Vela Beltran, Helena, Bustelo Yáñez, Christian   +2 more
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What makes HPC to be HPC

First presentation to introduce the workshop "System Administration for HPC" 
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2010
High performance cluster computers are very popular due to its low price and scalability. But several new issues must be attended while programming on such systems. The most important are bandwidth of the interconnect and I/O storage speed. Problem of uniform data processing can be described in terms of queueing theory for estimations of computation ...
openaire   +1 more source

Special Issue on the pervasive nature of HPC (PN‐HPC)

Concurrency and Computation: Practice and Experience
SummaryThis special issue on the Pervasive Nature of HPC (PN‐HPC) collects an extension of the most valuable works presented at the sixth Workshop on Models, Algorithms and Methodologies for Hybrid Parallelism in New HPC Systems (MAMHYP‐22), held in Gdansk (Poland) in September 2022, jointly with the 14th conference on Parallel Processing and Applied ...
Marco Lapegna, Valeria Mele, Raffaele Montella, Lukasz Szustak   +3 more
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HPC challenge---The 2006 HPC challenge awards

Proceedings of the 2006 ACM/IEEE conference on Supercomputing - SC '06, 2006
Dongarra, Jack, Kepner, Jeremy
openaire   +3 more sources

Changing technologies of HPC

1996
In the last years the field of High Performance Computing (HPC) faced a major move of their building blocks —the computing nodes— away from proprietary designs towards nodes built out of workstation boards. This movement came along with the success of companies like Silicon Graphics and IBM.
Dongarra, Jack, Meuer, Hans Werner, Simon, Horst D, Strohmaier, Erich   +3 more
openaire   +5 more sources

HPC Cloud Bad; HPC in the Cloud Good

2013 IEEE 27th International Symposium on Parallel and Distributed Processing, 2013
For most of the past two decades - since the rise of clustering in the mid-1990s - the HPC community has created its own IT components for deploying, managing, monitoring, and using horizontally-scaled resources to run its technical workloads. Historically, these tools have differed significantly from those used in commercial data centers, primarily ...
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Nonmyeloablative HPC transplantation

Transfusion, 2000
T, Repka, D J, Weisdorf
openaire   +2 more sources