SMaSH: A Benchmarking Toolkit for Human Genome Variant Calling
Motivation: Computational methods are essential to extract actionable information from raw sequencing data, and to thus fulfill the promise of next-generation sequencing technology. Unfortunately, computational tools developed to call variants from human
Bresler, Ma'ayan+9 more
core +1 more source
Comparison of Ability of Defective Foreign Genomes (Para and Mac) Carried by Human Adenoviruses to Induce SV40 Transplantation Immunity [PDF]
Fred Rapp+3 more
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Elevated levels of apolipoprotein[a] (apo[a]) and apolipoprotein A-I (apoA-I) are associated, respectively, with increased and decreased atherosclerosis risk, in both humans and transgenic mice.
A C Liu+3 more
doaj +1 more source
Persistence of the cytomegalovirus genome in human cells [PDF]
Edward S. Mocarski, Mark F. Stinski
openalex +1 more source
K-mer analysis of long-read alignment pileups for structural variant genotyping
Accurately genotyping structural variant (SV) alleles is crucial to genomics research. We present a novel method (kanpig) for genotyping SVs that leverages variant graphs and k-mer vectors to rapidly generate accurate SV genotypes.
Adam C. English+4 more
doaj +1 more source
Background COVID-19 vaccine efficacy was determined by the participation of individuals from diverse backgrounds in clinical trials. While these trials recruited participants with chronic conditions, little is known about how sentiments of mistrust ...
Khadijah Abdallah+8 more
doaj +1 more source
Detection by complementation of defective or uninducible (herpes simplex type 1) virus genomes latent in human ganglia. [PDF]
Stuart M. Brown+4 more
openalex +1 more source
Epstein-Barr virus and human chromosomes: close association of the resident viral genome and the expression of the virus-determined nuclear antigen (EBNA) with the presence of chromosome 14 in human-mouse hybrid cells. [PDF]
Kohtaro Yamamoto+5 more
openalex +1 more source
Properties of the genome in normal and SV-40 transformed WI-38 human diploid fibroblasts. III. Turnover of nonhistone chromosomal proteins and their phosphate groups [PDF]
Margarida O. Krause+2 more
openalex +1 more source