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Automatic cell counting with ImageJ

Analytical Biochemistry, 2015
Cell counting is an important routine procedure. However, to date there is no comprehensive, easy to use, and inexpensive solution for routine cell counting, and this procedure usually needs to be performed manually. Here, we report a complete solution for automatic cell counting in which a conventional light microscope is equipped with a web camera to
exaly   +3 more sources

Numerical wave propagation in ImageJ

Applied Optics, 2015
An ImageJ plugin for numerical wave propagation is presented. The plugin provides ImageJ, the well-known software for image processing, with the capability of computing numerical wave propagation by the use of angular spectrum, Fresnel, and Fresnel-Bluestein algorithms.
Pablo, Piedrahita-Quintero   +2 more
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Basic Image Analysis and Manipulation in ImageJ

Current Protocols in Molecular Biology, 2013
AbstractImage analysis methods have been developed to provide quantitative assessment of microscopy data. In this unit, basic aspects of image analysis are outlined, including software installation, data import, image processing functions, and analytical tools that can be used to extract information from microscopy data using ImageJ.
Sean M Hartig
exaly   +3 more sources

MREJ: MRE elasticity reconstruction on ImageJ

Computers in Biology and Medicine, 2013
Magnetic resonance elastography (MRE) is a promising method for health evaluation and disease diagnosis. It makes use of elastic waves as a virtual probe to quantify soft tissue elasticity. The wave actuator, imaging modality and elasticity interpreter are all essential components for an MRE system.
Kui Xiang   +3 more
openaire   +2 more sources

Measurement of cell traction forces with ImageJ

2015
The quantification of cell traction forces requires three key steps: cell plating on a deformable substrate, measurement of substrate deformation, and the numerical estimation of the corresponding cell traction forces. The computing steps to measure gel deformation and estimate the force field have somehow limited the adoption of this method in cell ...
Martiel, Jean-Louis   +7 more
openaire   +3 more sources

NanoIndentation, an ImageJ Plugin for the Quantification of Cell Mechanics

2021
Growth and morphogenesis in plants depend on cell wall mechanics and on turgor pressure. Nanoindentation methods, such as atomic force microscopy (AFM), enable measurements of mechanical properties of a tissue at subcellular resolution, while confocal microscopy of tissues expressing fluorescent reporters indicates cell identity. Associating mechanical
Mirabet, Vincent   +7 more
openaire   +3 more sources

napari-imagej: ImageJ ecosystem access from napari

Nature Methods, 2023
Gabriel J. Selzer   +5 more
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