Results 11 to 20 of about 105,918 (288)

indelPost: harmonizing ambiguities in simple and complex indel alignments [PDF]

open access: bronzeBioinform., 2021
SUMMARY Small insertions and deletions (indels) in nucleotide sequence may be represented differently between mapping algorithms and variant callers, or in the flanking sequence context.
Kohei Hagiwara   +3 more
openalex   +2 more sources

Imputation accuracy of bovine spongiform encephalopathy-associated PRNP indel polymorphisms from middle-density SNPs arrays [PDF]

open access: goldCzech Journal of Animal Science, 2014
Statistical methods of imputation allow predicting genotypes of markers (which were not genotyped in the whole population) based on known linkage disequilibrium relationships between the flanking polymorphisms and the information obtained from reference ...
Artur Gurgul   +4 more
openalex   +3 more sources

Development of SNP and InDel markers by genome resequencing and transcriptome sequencing in radish (Raphanus sativus L.)

open access: yesBMC Genomics, 2023
Background Single nucleotide polymorphisms (SNPs) and insertions/deletions (InDels) are the most abundant genetic variations and widely distribute across the genomes in plant.
Yadong Li   +9 more
semanticscholar   +1 more source

Small Insertions and Deletions Drive Genomic Plasticity during Adaptive Evolution of Yersinia pestis

open access: yesMicrobiology Spectrum, 2022
The life cycle of Yersinia pestis has changed a lot to adapt to flea-borne transmission since it evolved from an enteric pathogen, Yersinia pseudotuberculosis.
Yarong Wu   +6 more
doaj   +1 more source

Development and Validation of SNP and InDel Markers for Pod-Shattering Tolerance in Soybean

open access: yesInternational Journal of Molecular Sciences, 2022
Pod-shattering causes a significant yield loss in many soybean cultivars. Shattering-tolerant cultivars provide the most effective approach to minimizing this loss.
Jeong-Hyun Seo   +8 more
semanticscholar   +1 more source

Sequencing and identification of single nucleotide polymorphisms of Partial myostatin gene in dromedary and Bactrian camels [PDF]

open access: yesمجله بیوتکنولوژی کشاورزی, 2016
Myostatin (MSTN) is a member of the transforming growth factor-β superfamily (TGF-β) and is an important negative regulator of muscle growth in vertebrates.
Nemat Hedayat-Evrigh   +3 more
doaj   +1 more source

Forensic efficiency evaluation of a novel multiplex panel of InDels and STRs in the Guizhou Han population and its phylogenetic relationships with other reference populations

open access: yesAnnals of Human Biology, 2023
Background Insertion/deletion polymorphism (InDel), as the third genetic marker, has been given a lot of attention by forensic geneticists since it has the advantages of extensive distributions in the human genome, small amplicon, and low mutation rate ...
Yanhua Zheng   +10 more
doaj   +1 more source

Systematic Evaluation of a Novel 6-dye Direct and Multiplex PCR-CE-Based InDel Typing System for Forensic Purposes

open access: yesFrontiers in Genetics, 2022
Insertion/deletion (InDel) polymorphisms, combined desirable characteristics of both short tandem repeats (STRs) and single nucleotide polymorphisms (SNPs), are considerable potential in the fields of forensic practices and population genetics.
Haoliang Fan   +8 more
semanticscholar   +1 more source

Phylogenetic Position of a New Trisetacus Mite Species (Nalepellidae) Destroying Seeds of North American Junipers and New Hypotheses on Basal Divergence of Eriophyoidea

open access: yesInsects, 2022
Eriophyoid mites of the genus Trisetacus Keifer are widespread parasites of conifers. A new oligophagous species, T. indelis n. sp., was discovered severely damaging seeds of North American junipers (Juniperus osteosperma, J.
Philipp E. Chetverikov   +6 more
doaj   +1 more source

An interpretation of the genetic polymorphism and population genetic background of Ankang Han population via a novel InDel panel

open access: yesForensic Sciences Research, 2021
In this research, genotyping data of 43 InDel loci in 311 Han individuals in Ankang city, Shaanxi province, China were detected using a self-developed five-dye multiplex amplification panel.
Wei Cui   +8 more
doaj   +1 more source

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