Results 151 to 160 of about 22,613 (244)

MicrobTiSDA: A flexible R package for inferring interspecies interactions and abundance dynamics in microbiome time‐series data

open access: yesiMetaOmics, EarlyView.
MicrobTiSDA is a user‐friendly and flexible R package specifically designed for longitudinal microbiome data analysis. By integrating process‐oriented functional modules—including data input, data preprocessing, interspecies interaction inference, natural spline regression modeling, temporal pattern clustering, and random forest classification ...
Shijia Li   +5 more
wiley   +1 more source

Biosynthesis gene cluster‐containing species drive microbial community stability under thermal stress through enhanced ecological cohesion

open access: yesiMetaOmics, EarlyView.
The study framework for exploring microbial community assembly and community stability of biosynthesis gene cluster (BGC)‐containing species under thermal stress (20°C–65°C) during 39 days of spontaneous fermentation. Temperature gradients during spontaneous fermentation reshape microbial community assembly, driving pronounced succession in both ...
Shibo Ban   +6 more
wiley   +1 more source

Functionally complementary bacterial inoculant coordinates arbuscular mycorrhizal fungi to improve Angelica sinensis root yield and quality

open access: yesiMetaOmics, EarlyView.
Comprehensive understanding of how diverse PGPR strains enhance the rhizosphere microenvironment remains a considerable challenge. Here, we provide experimental evidence that a functionally synergistic composite microbial formulation can markedly enhance growth performance and improve the quality attributes in Angelica sinensis.
Zongyu Zhang   +13 more
wiley   +1 more source

Microbial metabolites in tumor epigenetic regulation

open access: yesiMeta, EarlyView.
The gut microbiome modulates tumor epigenetic regulation through bioactive metabolites derived from dietary substrates. Microbiota‐produced SCFAs, secondary BAs, one‐carbon metabolites, and tryptophan‐derived ligands regulate histone acetylation, DNA methylation, and chromatin remodeling via HDAC, DNMT, AhR, and metabolic cofactor‐dependent pathways ...
Wangzheqi Zhang   +31 more
wiley   +1 more source

Functional Stability Despite Taxonomic Changes in Mixed‐Species Foraging Flock Participants Along an Elevational Gradient in Knuckles Montane Reserve, Sri Lanka 斯里兰卡纳克斯山地保护区 (Knuckles Montane Reserve) 海拔梯度上混合物种觅食群参与者的功能稳定性与分类变化

open access: yesIntegrative Conservation, EarlyView.
This research reveals the functional stability of mixed species foraging flocks (MSF) and their foraging height change with different taxonomic differences along the elevational gradient at Knuckles Montane Reserve, Sri Lanka. This offers new insights into how MSFs sustain with the elevational gradients supporting the altitudinal shifting species ...
Vimukthi. R. Gunasekeara   +3 more
wiley   +1 more source

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