Prediction of potential barcoding sites on ITS1 by wavelet transform [PDF]
Journal of Biomolecular Structure and Dynamics, 2015 For sustainable development, biodiversity conservation and life-quality improvement must be simultaneously considered. Molecular techniques have greatly impacted biotechnology. These methods have, in particular, improved the capability to investigate the fine differences among organisms and, as a consequence, to better investigate the effects on ...
MAGGI, NORBERT +2 more
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Next generation sequencing analysis reveals a relationship between rDNA unit diversity and locus number in Nicotiana diploids [PDF]
, 2012 © 2012 Matyášek et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and ...
Fulnecek, J +7 more
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Slx9p facilitates efficient ITS1 processing of pre-rRNA in Saccharomyces cerevisiae [PDF]
RNA, 2006 Slx9p (Ygr081cp) is a nonessential yeast protein previously linked genetically with the DNA helicase Sgs1p. Here we report that Slx9p is involved in ribosome biogenesis in the yeast Saccharomyces cerevisiae. Deletion of SLX9 results in a mild growth defect and a reduction in the level of 18S rRNA. Co-immunoprecipitation experiments showed that Slx9p is
Bax, R., Raue, H.A., Vos, J.C.
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Pyrosequencing analysis of fungal assemblages from geographically distant, disparate soils reveals spatial patterning and a core mycobiome [PDF]
, 2013 Identifying a soil core microbiome is crucial to appreciate the established microbial consortium, which is not usually subjected to change and, hence, possibly resistant/resilient to disturbances and a varying soil context. Fungi are a major part of soil
Bagella, Simonetta +13 more
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Internal transcribed spacer 1 secondary structure analysis reveals a common core throughout the anaerobic fungi (Neocallimastigomycota). [PDF]
PLoS ONE, 2014 The internal transcribed spacer (ITS) is a popular barcode marker for fungi and in particular the ITS1 has been widely used for the anaerobic fungi (phylum Neocallimastigomycota).
Christian Koetschan +7 more
doaj +1 more source
The impact of one-decade ecological disturbance on genetic changes : a study on the brine shrimp Artemia urmiana from Urmia Lake, Iran [PDF]
, 2019 Urmia Lake, the largest natural habitat of the brine shrimp Artemia urmiana, has progressively desiccated over the last two decades, resulting in a loss of 80% of its surface area and producing thousands of hectares of arid salty land.
Asem, Alireza +3 more
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Folia Microbiologica, 2013 The diversity of anaerobic fungi was evaluated in cow semiliquid manure obtained from input homogenizing tank of biogas plant. Among three sets of tested primers, the combination of fungal universal ITS1F and Neocallimastigales specific Neo QPCR Rev primers was selected and used for the construction of clone library.
S. Sirohi +5 more
semanticscholar +3 more sources
Efficiency of ITS1-5.8S-ITS2 region in identifying Cordyceps species [PDF]
Vietnam Journal of Biotechnology, 2020 Cordyceps genus is a well-known traditional medicine worldwide. It contains abundant physiological active compounds that were demonstrated to perform benefit in reducing progression of cancer as well as protecting human health. Accurately classifying species in this genus is essential in order to prevent commercial counterfeit medicines.
Le Thi Thu Hien, Ha Hong Hanh
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Molecular identification of different trypanosome species and subspecies in tsetse flies of northern Nigeria [PDF]
, 2016 Background: Animal African Trypanosomiasis (AAT) is caused by several species of trypanosomes including Trypanosoma congolense, T. vivax, T. godfreyi, T. simiae and T. brucei. Two of the subspecies of T. brucei also cause Human African Trypanosomiasis.
Ciosi, Marc +8 more
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Characterisation of Fourteen Accessions of Trichosanthes cucumerina from Nigeria Using Internal Transcribed Spacer [PDF]
Journal of Genetic ResourcesSnake gourd botanically known as Trichosantes cucumerina locally called tomato agwo. T.cucumerina is considered a neglected and underutilised crop. Detailed characterisation of this crop is not known in Nigeria and other African countries. This study was
Ann Osuagwu +3 more
doaj +1 more source