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The Chemistry Development Kit (CDK):  An Open-Source Java Library for Chemo- and Bioinformatics

open access: yesJournal of Chemical Information and Computer Sciences, 2003
The Chemistry Development Kit (CDK) is a freely available open-source Java library for Structural Chemo-and Bioinformatics. Its architecture and capabilities as well as the development as an open-source project by a team of international collaborators ...
Christoph C Steinbeck   +2 more
exaly   +2 more sources

PIT: a practical mutation testing tool for Java (demo)

open access: greenInternational Symposium on Software Testing and Analysis, 2016
Mutation testing introduces artificial defects to measure the adequacy of testing. In case candidate tests can distinguish the behaviour of mutants from that of the original program, they are considered of good quality -- otherwise developers need to ...
Henry Coles   +4 more
openalex   +3 more sources

The Jalview Java alignment editor

open access: yesBioinformatics, 2004
Geoffrey J Barton
exaly   +2 more sources

Static Call Graph Combination to Simulate Dynamic Call Graph Behavior

open access: yesIEEE Access, 2022
Call graphs are fundamental for many higher-level code analyses. The selection of the most appropriate call graph construction tool for an analysis is not always straightforward and depends on the purpose of the results’ further usage.
Zoltan Sagodi   +4 more
doaj   +1 more source

Old Semarang City: the sustainability of traditional city patterns in Java

open access: yesJournal of Asian Architecture and Building Engineering, 2023
Research on old city patterns in the world has become an area for archeologists. Historians and archeologists in Java, Indonesia, discovered a city center with a North-South axis, alun-alun (open space) surrounding by the government and religious ...
R. Siti Rukayah   +2 more
doaj   +1 more source

The Typology of Pesantren’s Islamic Thoughts in Java: A Qualitative Study

open access: yesJurnal Pendidikan Islam, 2022
Purpose – This study aims to present a typology of Pesantren in the current modern era based on the basic ideas of each Pesantren. This study is essential as part of efforts to dynamize the development of Pondok Pesantren in Indonesia.
Muhammad Ikhsanudin   +2 more
doaj   +1 more source

Nopol: Automatic Repair of Conditional Statement Bugs in Java Programs [PDF]

open access: yesIEEE Transactions on Software Engineering, 2018
We propose Nopol, an approach to automatic repair of buggy conditional statements (i.e., if-then-else statements). This approach takes a buggy program as well as a test suite as input and generates a patch with a conditional expression as output.
J. Xuan   +7 more
semanticscholar   +1 more source

The Qur’anic mantras recited by Shamanic Santri in Java, Indonesia

open access: yesHTS Teologiese Studies/Theological Studies, 2021
To overcome various problems, the practice of shamanism has gained popularity in Javanese society. The belief of the society in this practice is increasing, mainly because of the involvement of the kyai (an honorific title of the Muslim clergy), who ...
Hasyim Muhammad   +3 more
doaj   +1 more source

Implications for megathrust earthquakes and tsunamis from seismic gaps south of Java Indonesia

open access: yesScientific Reports, 2020
Relocation of earthquakes recorded by the agency for meteorology, climatology and geophysics (BMKG) in Indonesia and inversions of global positioning system (GPS) data reveal clear seismic gaps to the south of the island of Java.
S. Widiyantoro   +11 more
semanticscholar   +1 more source

A Statistical Evaluation of The Depth of Inheritance Tree Metric for Open-Source Applications Developed in Java

open access: yesFoundations of Computing and Decision Sciences, 2021
The Depth of Inheritance Tree (DIT) metric, along with other ones, is used for estimating some quality indicators of software systems, including open-source applications (apps).
Prykhodko Sergiy   +2 more
doaj   +1 more source

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