EPIK: precise and scalable evolutionary placement with informative k-mers. [PDF]
Bioinformatics, 2023 Romashchenko N +3 more
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kGWASflow: a modular, flexible, and reproducible Snakemake workflow for k-mers-based GWAS. [PDF]
G3 (Bethesda), 2023 Corut AK, Wallace JG.
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Effects of spaced k-mers on alignment-free genotyping. [PDF]
Bioinformatics, 2023 Häntze H, Horton P.
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Locality-preserving minimal perfect hashing of k-mers. [PDF]
Bioinformatics, 2023 Pibiri GE, Shibuya Y, Limasset A.
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On the Maximal Independent Sets of k-mers with the Edit Distance. [PDF]
ACM BCB, 2023 Ma L, Chen K, Shao M.
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Identifying species-specific k-mers for fast and accurate metagenotyping with Maast and GT-Pro. [PDF]
STAR Protoc, 2023 Shi ZJ, Nayfach S, Pollard KS.
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SPRISS: approximating frequent k-mers by sampling reads, and applications. [PDF]
Bioinformatics, 2022 Santoro D +3 more
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Flexible protein database based on amino acid k-mers. [PDF]
Sci Rep, 2022 Déraspe M +4 more
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Plasmer: an Accurate and Sensitive Bacterial Plasmid Prediction Tool Based on Machine Learning of Shared k-mers and Genomic Features. [PDF]
Microbiol Spectr, 2023 Zhu Q, Gao S, Xiao B, He Z, Hu S.
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