Results 171 to 180 of about 10,955,529 (276)

Estimation of the Whitefly Bemisia tabaci Genome Size Based on k-mer and Flow Cytometric Analyses [PDF]

, 2015
Wenbo Chen, Daniel Hasegawa, Kathiravetpillai Arumuganathan, Alvin M. Simmons, William M. Wintermantel, Zhangjun Fei, Kai‐Shu Ling   +6 more
openalex   +1 more source

k -mer-Based Metagenomics Tools Provide a Fast and Sensitive Approach for the Detection of Viral Contaminants in Biopharmaceutical and Vaccine Manufacturing Applications Using Next-Generation Sequencing

, 2021
Madolyn L. MacDonald, Shawn W. Polson, Kelvin H. Lee   +2 more
openalex   +1 more source

Diversity of FAAL enzymes and prediction of their substrate specificity using FAALPred

Protein Science, Volume 35, Issue 2, February 2026.
Abstract FAALs (fatty acyl‐AMP ligases) recruit and incorporate fatty acids during the biosynthesis of secondary metabolites. Their diversity, distribution, and substrate specificity remain poorly understood, which limits functional predictions from sequence data.
Anne Liong, Leandro de Mattos Pereira, Pedro N. Leão   +2 more
wiley   +1 more source

Mem-based pangenome indexing for k-mer queries

Algorithms for Molecular Biology
Pangenomes are growing in number and size, thanks to the prevalence of high-quality long-read assemblies. However, current methods for studying sequence composition and conservation within pangenomes have limitations.
Stephen Hwang, Nathaniel K. Brown, Omar Y. Ahmed, Katharine M. Jenike, Sam Kovaka, Michael C. Schatz, Ben Langmead   +6 more
doaj   +1 more source

MQF and buffered MQF: quotient filters for efficient storage of k-mers with their counts and metadata. [PDF]

BMC Bioinformatics, 2021
Shokrof M, Brown CT, Mansour TA.
europepmc   +1 more source

Mass Spectrometry-Based Analysis of Surface Proteins in Staphylococcus aureus Clinical Strains: Identification of Promising k-mer Targets for Diagnostics [PDF]

Ema Svetlicic, Leonarda Achá Alarcón, Roger Karlsson, Carsten Jers, Ivan Mijakovic̀   +4 more
openalex   +1 more source

Seasonal Fluctuations of the Seagrass Holobiont under Contrasting Environmental Conditions

Environmental Microbiology Reports, Volume 18, Issue 1, February 2026.
(A) The inharmonious state of the Coorong and the different sample types collect with throughout this study. (B, C) Biofilm, including the presence of diatoms and bacteria, attached on the leaves of Ruppia. ABSTRACT Microbial communities are widely recognised as indicative of ecosystem health.
Tamar Jamieson, Mohsen Chitsaz, Angélique Gobet, Michelle Waycott, Sophie C. Leterme   +4 more
wiley   +1 more source

AFLAP: assembly-free linkage analysis pipeline using k-mers from genome sequencing data. [PDF]

Genome Biol, 2021
Fletcher K, Zhang L, Gil J, Han R, Cavanaugh K, Michelmore R.   +5 more
europepmc   +1 more source

Change in healthcare utilization before and after COVID‐19 using data from 1.5 million individuals

Journal of Internal Medicine, Volume 299, Issue 2, Page 255-270, February 2026.
Abstract Background and objective Post‐infectious sequelae can increase burden on healthcare systems. We aimed to assess the long‐term effect of COVID‐19 on healthcare utilization across all levels of care. Methods In this register‐based cohort study, we included all adult (≥18 years) residents in Sweden's two largest counties with a registered COVID ...
Maria Bygdell, Erik Bülow, Simon B. Larsson, Robert Sigström, Huiqi Li, Jari Martikainen, Ailiana Santosa, Lisa Lundberg‐Morris, Susannah Leach, Magnus Gisslén, Carl Bonander, Jörgen Månsson, Kristoffer Strålin, Fredrik Nyberg   +13 more
wiley   +1 more source

HLA‐DRB1 Allelic Combinations Differentially Shape Dendritic Cell Antigen Presentation Enhanced by Tumour Cell Line Lysate‐Pulsing

HLA, Volume 107, Issue 2, February 2026.
ABSTRACT The anti‐tumour immune response plays a pivotal role in eliminating tumour cells, with the presence of tumour‐infiltrating lymphocytes (TILs) often correlated with improved patient outcomes. Among these, CD4+ T lymphocytes act as key orchestrators of the immune response, functioning as effector and regulatory cells, and are essential for ...
Gonzalo Lázaro, Juan A. Cedano, Maitane Faus, Carme Roura‐Mir, Laia Garrigós, José Pérez‐García, Javier Román‐García, Javier Cortés, Andrea Aran, Mercè Martí   +9 more
wiley   +1 more source