Results 81 to 90 of about 57,228 (156)
Molecular Ecology, EarlyView.Abstract The black abalone, Haliotis cracherodii, is a large, long‐lived marine mollusc that inhabits rocky intertidal habitats along the coast of California and Mexico. In 1985, populations were impacted by a bacterial disease known as withering syndrome (WS) that wiped out >90% of individuals, leading to the closure of all U.S.
Brock Wooldridge +10 more
wiley +1 more source
The K-mer File Format: a standardized and compact disk representation of sets of k-mers. [PDF]
Bioinformatics, 2022 Dufresne Y +8 more
europepmc +1 more source
Molecular Ecology, EarlyView.Abstract Population genomics analysis holds great potential for informing conservation of endangered populations. We focused on a controversial case of European whitefish (Coregonus spp.) populations. The endangered North Sea houting is the only coregonid fish that tolerates oceanic salinities and was previously considered a species (C.
Aja Noersgaard Buur Tengstedt +7 more
wiley +1 more source
Measuring the Invisible: The Sequences Causal of Genome Size Differences in Eyebrights (Euphrasia) Revealed by k-mers. [PDF]
Front Plant Sci, 2022 Becher H, Sampson J, Twyford AD.
europepmc +1 more source
Molecular Ecology, EarlyView.Abstract Colour signals play pivotal roles in different communication systems, and the evolution of these characters has been associated with behavioural ecology, integumentary production processes and perceptual mechanisms of the species involved. Here, we present the first insight into the molecular and histological basis of skin colour polymorphism ...
Juliane P. C. Monteiro +7 more
wiley +1 more source
CMIC: predicting DNA methylation inheritance of CpG islands with embedding vectors of variable-length k-mers. [PDF]
BMC Bioinformatics, 2022 Maruyama O +5 more
europepmc +1 more source
Gene Expression Shifts in Emperor Penguin Adaptation to the Extreme Antarctic Environment
Molecular Ecology, EarlyView.ABSTRACT Gene expression can accelerate ecological divergence by rapidly tweaking the response of an organism to novel environments, with more divergent environments exerting stronger selection and supposedly, requiring faster adaptive responses. Organisms adapted to extreme environments provide ideal systems to test this hypothesis, particularly when ...
Josephine R. Paris +11 more
wiley +1 more source
Reduced ambiguity and improved interpretability of bacterial genome-wide associations using gene-cluster-centric k-mers. [PDF]
Microb Genom, 2023 Sommer H, Djamalova D, Galardini M.
europepmc +1 more source
Molecular Ecology, EarlyView.ABSTRACT Herbivorous insects tolerate chemical and metabolic variation in their host plant diet by modulating physiological traits. Insect immune response is one such trait that plays a crucial role in maintaining fitness but can be heavily influenced by variation in host plant quality.
Su'ad A. Yoon +9 more
wiley +1 more source
Efficient association mapping from k-mers-An application in finding sex-specific sequences. [PDF]
PLoS One, 2021 Mehrab Z, Mobin J, Tahmid IA, Rahman A.
europepmc +1 more source