Results 1 to 10 of about 4,952 (203)
Frontiers in Bioinformatics, 2021 Ten years ago, the dramatic rise in the number of microbial genomes led to an inflection point, when the approach of finding short, exact matches in a comprehensive database became just as accurate as older, slower approaches.
Steven L. Salzberg +5 more
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You Actually Look Twice At it (YALTAi): using an object detection approach instead of region segmentation within the Kraken engine [PDF]
Journal of Data Mining and Digital Humanities, 2023 Layout Analysis (the identification of zones and their classification) is the first step along line segmentation in Optical Character Recognition and similar tasks.
Thibault Clérice
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HIGH FIDELITY AND REDUCED ORDER SOLUTIONS TO AN SMR-LEVEL PROGRESSION PROBLEM WITH THE KRAKEN COMPUTATIONAL FRAMEWORK [PDF]
EPJ Web of Conferences, 2021 Kraken is a new computational reactor analysis framework under development at VTT Technical Research Center of Finland Ltd. The framework builds heavily on the new generation of Finnish simulation codes such as the Serpent Monte Carlo code, the Ants ...
Valtavirta Ville +6 more
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Ultrafast and accurate 16S rRNA microbial community analysis using Kraken 2 [PDF]
Microbiome, 2020 Background For decades, 16S ribosomal RNA sequencing has been the primary means for identifying the bacterial species present in a sample with unknown composition.
Jennifer Lu, Steven L. Salzberg
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Optimization of 16S RNA Sequencing and Evaluation of Metagenomic Analysis with Kraken 2 and KrakenUniq [PDF]
DiagnosticsBackground/Objectives: 16S ribosomal RNA sequencing has, for several years, been the main means of identifying bacterial and archaeal species. Low-throughput Sanger sequencing is often used for the detection and identification of microbial species, but ...
Nasserdine Papa Mze +5 more
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Improved metagenomic analysis with Kraken 2 [PDF]
Genome Biology, 2019 Although Kraken’s k-mer-based approach provides a fast taxonomic classification of metagenomic sequence data, its large memory requirements can be limiting for some applications.
Derrick E. Wood +2 more
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The Kraken: when myth encounters science [PDF]
História, Ciências, Saúde: Manguinhos, 2014 Hundreds of years ago, sailors were terrified by the Kraken, a dreadful sea monster capable of sinking ships and with a taste for human flesh. Today we know the legends of this monster were based on sightings of giant squids.
Rodrigo B. Salvador, Barbara M. Tomotani
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Assessment of plasma derived microbiome profiles in lung cancer using targeted and whole exome sequencing [PDF]
npj Systems Biology and ApplicationsMicrobial infections contribute to ~20% of malignancy. Plasma-derived cell-free DNA presents a promising avenue for non-invasive cancer diagnostics, capturing microbial signatures.
Vichitra Behel +21 more
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Proceedings of the 1st International Workshop on Data Economy, 2022 Koch, Karl +4 more
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Scylla, Carcharoth, Kraken atd. O motivaci jmen kultivarů masožravých rostlin
Folia Onomastica CroaticaČlánek analyzuje dvě stě jmen kultivarů masožravých rostlin publikovaných v Carnivorous Plant Newsletter, tj. přibližně čtvrtinu všech známých kultivarů těchto rostlin. Vyskytují se mezi nimi jména tvořená z vlastních jmen i z apelativ.
Jan Holeš
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