Topology‐Aware Deep Learning on Higher‐Order Structures for Drug Response Prediction
We present TopDr, a topology‐aware deep learning framework that encodes both drugs and cell lines as multiscale simplicial complexes, capturing interactions at the 0‐, 1‐, and 2‐simplex levels. By jointly integrating local higher‐order neighborhoods and global topological structures, TopDr generates enriched representations for sensitivity prediction ...
Cong Shen +3 more
wiley +1 more source
QTL mapping, validation, and candidate gene predicting for maize plant architecture traits via bulked segregant analysis plus linkage analysis with F₂ population. [PDF]
Wang S, Wang Y, Li X, Ge B, Su C.
europepmc +1 more source
This review explores the convergence of artificial intelligence technologies in modeling drug–drug and drug–target interactions. By evaluating advanced feature engineering, architectural innovations, and learning paradigms reveals shared evolutionary trends and critical challenges, such as cold‐start settings and shortcut learning.
Xin Sun, Tong Wang
wiley +1 more source
Drought adaptation in spring wheat seedlings relies on coordinated deep root architecture and cortical tissue allocation. [PDF]
Li X +9 more
europepmc +1 more source
A Symmetric Cogeneration Fuel Cell for Coupled Production of Hydrogen, Ammonia and Formate
A symmetric cogeneration fuel cell integrating value‐added chemical synthesis with electricity generation by coupling formaldehyde oxidation with the nitrate reduction was developed. This work highlights the broader potential of symmetric cogeneration fuel cells as a general platform for rational reaction pairing, offering a practical pathway to lower ...
Yingjie Song +8 more
wiley +1 more source
Federated learning with dynamic weighted aggregation for multi-crop disease detection: a hybrid CNN-transformer approach. [PDF]
Shashank R, Bhavadharini RM.
europepmc +1 more source
We developed the ASCAL pipeline, integrating complementary spatial transcriptomics, to construct a high‐fidelity mouse whole‐eye single‐cell atlas. Applying ASCAL to a retinal artery occlusion (RAO) model revealed spatially restricted immune activation localized to the ganglion cell layer and the selective depletion of a translationally active, outer ...
Chen Du +11 more
wiley +1 more source
Research on maize growth simulation and organ morphology co-modeling driven by multimodal data fusion. [PDF]
Zhenghui Z +5 more
europepmc +1 more source
We screened 558 reverse transcriptases and engineered an optimized rat endogenous retrovirus‐derived variant, enRERV‐RT, via structure‐guided engineering and deep mutational scanning. This enhanced prime editor, based on the engineered RT, outperforms conventional M‐MLV‐RT systems across plant and animal cells, particularly at hard‐to‐edit loci ...
Linsha Ma +22 more
wiley +1 more source
Rose leaf disease classification and severity estimation using an interpretable vision transformer-based multi-task framework. [PDF]
Bohra M N +6 more
europepmc +1 more source

