PlantGFM: A Genomic Foundation Model for Discovery and Creation of Plant Genes
A plant genomic foundation model pre‐trained on 12 species enables both accurate gene prediction and de novo gene design. Through AI‐human knowledge screening, seven designed sequences showed transcriptional activity in plants, with two expressing stable proteins—demonstrating the first DNA‐RNA‐protein expression of LLM‐generated genes in plants and ...
Changhao Li +10 more
wiley +1 more source
Heterogeneous light environments induce plasticity in leaf morphology and photosynthesis of two sympodial bamboo species. [PDF]
Deng X +5 more
europepmc +1 more source
Topology‐Aware Deep Learning on Higher‐Order Structures for Drug Response Prediction
We present TopDr, a topology‐aware deep learning framework that encodes both drugs and cell lines as multiscale simplicial complexes, capturing interactions at the 0‐, 1‐, and 2‐simplex levels. By jointly integrating local higher‐order neighborhoods and global topological structures, TopDr generates enriched representations for sensitivity prediction ...
Cong Shen +3 more
wiley +1 more source
C<sub>4</sub> photosynthetic anatomy is associated with higher leaf hydraulic conductance and capacitance in Alloteropsis semialata. [PDF]
Zhou Y, Dunning LT, Liu H, Osborne CP.
europepmc +1 more source
A Symmetric Cogeneration Fuel Cell for Coupled Production of Hydrogen, Ammonia and Formate
A symmetric cogeneration fuel cell integrating value‐added chemical synthesis with electricity generation by coupling formaldehyde oxidation with the nitrate reduction was developed. This work highlights the broader potential of symmetric cogeneration fuel cells as a general platform for rational reaction pairing, offering a practical pathway to lower ...
Yingjie Song +8 more
wiley +1 more source
Drought adaptation in spring wheat seedlings relies on coordinated deep root architecture and cortical tissue allocation. [PDF]
Li X +9 more
europepmc +1 more source
We developed the ASCAL pipeline, integrating complementary spatial transcriptomics, to construct a high‐fidelity mouse whole‐eye single‐cell atlas. Applying ASCAL to a retinal artery occlusion (RAO) model revealed spatially restricted immune activation localized to the ganglion cell layer and the selective depletion of a translationally active, outer ...
Chen Du +11 more
wiley +1 more source
Rapid modeling of 3D rice canopy structure considering vertical heterogeneity and analysis of spectral response. [PDF]
Bai J +5 more
europepmc +1 more source
We screened 558 reverse transcriptases and engineered an optimized rat endogenous retrovirus‐derived variant, enRERV‐RT, via structure‐guided engineering and deep mutational scanning. This enhanced prime editor, based on the engineered RT, outperforms conventional M‐MLV‐RT systems across plant and animal cells, particularly at hard‐to‐edit loci ...
Linsha Ma +22 more
wiley +1 more source
Source-sink characterization, classification and responses to nitrogen in different wheat cultivars. [PDF]
Zhang S +5 more
europepmc +1 more source

