Results 41 to 50 of about 588,273 (328)

Computational approaches and software tools for genetic linkage map estimation in plants [PDF]

Briefings in Bioinformatics, 2009
Genetic maps are an important component within the plant biologist's toolkit, underpinning crop plant improvement programs. The estimation of plant genetic maps is a conceptually simple yet computationally complex problem, growing ever more so with the development of inexpensive, high-throughput DNA markers.
Jo Dicks, Jitender Cheema
openaire   +3 more sources

Haplo2Ped: a tool using haplotypes as markers for linkage analysis

BMC Bioinformatics, 2011
Background Generally, SNPs are abundant in the genome; however, they display low power in linkage analysis because of their limited heterozygosity. Haplotype markers, on the other hand, which are composed of many SNPs, greatly increase heterozygosity and
Zhang Yinan, Zhang Xianglong, Cheng Feng, Li Chaohua, Zeng Changqing   +4 more
doaj   +1 more source

Location of chlorogenic acid biosynthesis pathway and polyphenol oxidase genes in a new interspecific anchored linkage map of eggplant [PDF]

, 2014
© Gramazio et al.; licensee BioMed Central. 2014. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and ...
A Bombarely, A Cho, A Concellón, A Frary, A Kumar, A Moglia, A Stàgel, AP Singh, B Menin, BD Whitaker, C Chai, C Coetzer, C Comino, C Comino, C Ma, C Urbany, CM André, CM Rommens, D Chagné, D Kosambi, D Luthria, E Portis, E Portis, E Portis, EC Ramirez, Elena Castillo, F Wu, F Wu, Francisco Javier Herraiz, G Mennella, H Fukuoka, H Fukuoka, Isabel Andújar, J Doyle, J Prohens, J Prohens, J Van Ooijen, Jaime Prohens, JR Stommel, K Shirasawa, K Yamakawa, KV Alheit, L Barchi, L Barchi, L Barchi, L Tran, M Di Guardo, M Doğan, M Jeuken, M Krzywinski, M Murata, M Plazas, M Plazas, Mariola Plazas, MC Daunay, MD Dos Santos, MD Raigón, P Byrne, P Vos, Pietro Gramazio, PM Hanson, R Kofler, R Lo Scalzo, R Niggeweg, R Shi, Rachel S Meyer, RN Lester, S Doganlar, S Doganlar, S Knapp, S Rozen, S Vilanova, Sandra Knapp, Santiago Vilanova, SM Newman, SM Shetty, T Nunome, T Nunome, T Nunome, T Vogt, TA Hall, The Angiosperm Phylogeny Group, TM Fulton, Y Ren, Z Huang   +84 more
core   +1 more source

The Clerical Resolution Online Widget (CROW): creating open-source software to make clerical review easier.

International Journal of Population Data Science, 2022
Objectives Quality assessment is an integral part of linkage, often involving clerical (manual) review of records. Excel spreadsheets are commonly used to review record pairs, which can be difficult to read across the screen.
Hannah O'Dair, Anthony G Edwards, Craig Scott   +2 more
doaj   +1 more source

Accuracy of record linkage software in merging dental administrative data sets: Accuracy of record linkage software

, 2013
To determine the accuracy of record matching using “Link King” software that uses an ordinal score for the certainty that linked records are valid matches.
Heather Beil, John S. Preisser, R. Gary Rozier   +2 more
openalex   +3 more sources

SLiM: Simulating Evolution with Selection and Linkage [PDF]

, 2013
SLiM is an efficient forward population genetic simulation designed for studying the effects of linkage and selection on a chromosome-wide scale. The program can incorporate complex scenarios of demography and population substructure, various models for ...
Messer, Philipp W.
core   +1 more source

SOFTWARE FOR GENETIC MAPPING AND ANALYSIS OF MARKER/TRAIT ASSOCIATIONS

Овощи России, 2016
The paper presents the information about technical tools and software wide used for statistic calculations and detection of linkage disequilibrium marker/trait as well as association between traits/genes and molecular markers based on identification of ...
N. V. Kocherina, Yu. V. Chesnokov
doaj   +1 more source

A proposed approach for standardized reporting of data linkage processes and results.

International Journal of Population Data Science, 2022
Objectives Population Data BC (PopData) is an agency in British Columbia, Canada, that routinely performs linkages of various administrative and researcher-collected data to a population spine.
Yinshan Zhao, Mike Jarrett, Kimberlyn McGail, Brent Hills   +3 more
doaj   +1 more source

Modernization of Record Linkage At ICES

International Journal of Population Data Science, 2020
Introduction Probabilistic Record Linkage of large databases requires a substantial amount of time and resources, resulting in significant costs. In addition, the process is subject to error, particularly during manual grey area resolution of uncertain ...
Mahmoud Azimaee, Nelson Chong, Charlotte Ma, Gordon Fehringer, Gangamma Kalappa, Nan Wang, Cheng Qian, Marian Vermeulen   +7 more
doaj  

LabPipe: an extensible bioinformatics toolkit to manage experimental data and metadata

BMC Bioinformatics, 2020
Background Data handling in clinical bioinformatics is often inadequate. No freely available tools provide straightforward approaches for consistent, flexible metadata collection and linkage of related experimental data generated locally by vendor ...
Bo Zhao, Luke Bryant, Rebecca Cordell, Michael Wilde, Dahlia Salman, Dorota Ruszkiewicz, Wadah Ibrahim, Amisha Singapuri, Tim Coats, Erol Gaillard, Caroline Beardsmore, Toru Suzuki, Leong Ng, Neil Greening, Paul Thomas, Paul Monks, Christopher Brightling, Salman Siddiqui, Robert C. Free   +18 more
doaj   +1 more source