Results 51 to 60 of about 2,583,540 (350)

Dynamic temperature selection for parallel tempering in Markov chain Monte Carlo simulations [PDF]

open access: yes, 2015
Modern problems in astronomical Bayesian inference require efficient methods for sampling from complex, high-dimensional, often multi-modal probability distributions.
W. Vousden, W. Farr, I. Mandel
semanticscholar   +1 more source

A New Improved Parsimonious Multivariate Markov Chain Model

open access: yesJournal of Applied Mathematics, 2013
We present a new improved parsimonious multivariate Markov chain model. Moreover, we find a new convergence condition with a new variability to improve the prediction accuracy and minimize the scale of the convergence condition.
Chao Wang, Ting-Zhu Huang
doaj   +1 more source

Semi-Markov graph dynamics. [PDF]

open access: yesPLoS ONE, 2011
In this paper, we outline a model of graph (or network) dynamics based on two ingredients. The first ingredient is a Markov chain on the space of possible graphs. The second ingredient is a semi-Markov counting process of renewal type. The model consists
Marco Raberto   +2 more
doaj   +1 more source

Efficient Word Alignment with Markov Chain Monte Carlo

open access: yesPrague Bulletin of Mathematical Linguistics, 2016
We present EFMARAL, a new system for efficient and accurate word alignment using a Bayesian model with Markov Chain Monte Carlo (MCMC) inference. Through careful selection of data structures and model architecture we are able to surpass the fast_align ...
Robert Östling, J. Tiedemann
semanticscholar   +1 more source

Markov Chains for Collaboration [PDF]

open access: yesMathematics Magazine, 2011
Consider a system of \(n\) players in which each initially starts on a different team. At each time step, we select an individual winner and an individual loser randomly and the loser joins the winner's team. The resulting Markov chain and stochastic matrix clearly have one absorbing state, in which all players are on the same team, but the ...
Robert Mena, Will Murray
openaire   +4 more sources

Refining the NaV1.7 pharmacophore of a class of venom‐derived peptide inhibitors via a combination of in silico screening and rational engineering

open access: yesFEBS Letters, EarlyView.
Venom peptides have shown promise in treating pain. Our study uses computer screening to identify a peptide that targets a sodium channel (NaV1.7) linked to chronic pain. We produced the peptide in the laboratory and refined its design, advancing the search for innovative pain therapies.
Gagan Sharma   +8 more
wiley   +1 more source

Applying diffusion-based Markov chain Monte Carlo. [PDF]

open access: yesPLoS ONE, 2017
We examine the performance of a strategy for Markov chain Monte Carlo (MCMC) developed by simulating a discrete approximation to a stochastic differential equation (SDE). We refer to the approach as diffusion MCMC.
Radu Herbei, Rajib Paul, L Mark Berliner
doaj   +1 more source

A large‐scale retrospective study in metastatic breast cancer patients using circulating tumour DNA and machine learning to predict treatment outcome and progression‐free survival

open access: yesMolecular Oncology, EarlyView.
There is an unmet need in metastatic breast cancer patients to monitor therapy response in real time. In this study, we show how a noninvasive and affordable strategy based on sequencing of plasma samples with longitudinal tracking of tumour fraction paired with a statistical model provides valuable information on treatment response in advance of the ...
Emma J. Beddowes   +20 more
wiley   +1 more source

Stochastic Methods for Analysis of Complex Hardware-Software Systems

open access: yesТруды Института системного программирования РАН, 2018
In this paper we consider Markov analysis of models of complex software and hardware systems. A Markov analysis tool can be used during verification processes of models of avionics systems.
A. A. Karnov, S. V. Zelenov
doaj   +1 more source

Consolidate Overview of Ribonucleic Acid Molecular Dynamics: From Molecular Movements to Material Innovations

open access: yesAdvanced Engineering Materials, EarlyView.
Molecular dynamics simulations are advancing the study of ribonucleic acid (RNA) and RNA‐conjugated molecules. These developments include improvements in force fields, long‐timescale dynamics, and coarse‐grained models, addressing limitations and refining methods.
Kanchan Yadav, Iksoo Jang, Jong Bum Lee
wiley   +1 more source

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