Results 171 to 180 of about 152,360 (260)

LMDmapper: an open-source desktop tool for spatial mapping of laser microdissection samples. [PDF]

Open Res Eur
Alberdi A, Ramirez J, Gaun N, Horisberger Z, Wang B, Trivedi U, Bogri A.   +6 more
europepmc   +1 more source

FAIR by design (TRACE): A Trusted Research Access & Collaboration Environment. [PDF]

BMC Med Inform Decis Mak
Müller M, Geisler BP, Shamas S, Bomhard NV, Hoster E, Pfirrmann M, Mansmann U.   +6 more
europepmc   +1 more source

refloraR: An R package for efficiently retrieving and analyzing plant specimen data from the Herbário Virtual Reflora

Applications in Plant Sciences, EarlyView.
Abstract Premise Advances in the digitization of herbarium collections are enabling open access to specimen data for research and conservation. In Brazil, the Herbário Virtual Reflora (HVR) hosts over 4.8 million high‐resolution images of botanical specimens and their associated data from 86 national and international herbaria.
Carlos Calderón del Cid, Ana Flávia Alves Versiane, Paula Leitman, Fabiana Ranzato Filardi, Rafaela Campostrini Forzza, Domingos Cardoso   +5 more
wiley   +1 more source

Herbarium‐based measurements are reliable predictors of fresh plant traits in Neotropical Myrtaceae

Applications in Plant Sciences, EarlyView.
Abstract Premise Herbarium specimens are increasingly used to extract morphological traits for ecological and evolutionary studies, yet the effects of tissue desiccation on trait measurements remain poorly understood. Here, we tested two hypotheses: (H1) whether higher tissue water content leads to greater measurement changes after herborization and ...
Yacov Kilsztajn, Lázaro Henrique Soares Moraes de Conceição, Thais Vasconcelos, Carolyn Elinore Barnes Proença, Vanessa Graziele Staggemeier   +4 more
wiley   +1 more source

Bridging Gaps in Standards for the Secondary Use of Health Data: Exploratory Standard, Tool Assessment, and Feasibility Study. [PDF]

JMIR Form Res
Shoshtarian Malak J, von Berlin L, Balaur I, Hussein R, Gribbon P, Gadiya Y, Abedian S, Kremer A, Sauermann S, J Núñez-Benjumea F, Declerck J, Madan S, Ćwiek-Kupczyńska H, Rohatsch L, Fröhlich H, Muehlendyck C, P Satagopam V.   +16 more
europepmc   +1 more source

Mining buried plant trait data from the Global Biodiversity Information Facility (GBIF): Comparison and integration with multiple plant trait databases

Applications in Plant Sciences, EarlyView.
Abstract Premise Despite the availability of several plant trait databases, significant traits remain undocumented for a substantial number of species. To address this issue, the current study explored digital text from the Global Biodiversity Information Facility (GBIF) as an innovative source of plant trait information and evaluated its capacity to ...
Takuro Katori, Michio Oguro
wiley   +1 more source

Nextstrain automates real-time phylogenetic analysis of open data for endemic and emerging pathogens. [PDF]

Bioinformatics
Andrews KR, Chang J, Roemer C, Hadfield J, Lin V, Brito AF, Daodu RO, Joia IA, Kistler K, Li A, Moncla LH, Paredes MI, Kühnert D, Torres LM, Voitl L, Aksamentov I, Hodcroft EB, Huddleston J, McCrone JT, Anderson JSJ, Sibley TR, Lee J, Neher RA, Bedford T.   +23 more
europepmc   +1 more source

Petal to the metal: The slow road to automating large‐scale phenology labeling for herbarium specimens

Applications in Plant Sciences, EarlyView.
Abstract Premise Herbarium specimens represent critical historical records of plant phenology, yet automating annotation of reproductive structures remains challenging given the diversity of floral morphologies, specimen age and quality, and image quality.
Erin L. Grady, Raphael LaFrance, Daijiang Li, Russell Dinnage, Ellen G. Denny, John Deck, Robert P. Guralnick   +6 more
wiley   +1 more source

Upscaling Genotyping by Amplicon Sequencing With GBAS-GUI. [PDF]

Mol Ecol Resour
Sonnenberg S, Vijayan T, Rupprecht C, Krenn YP, Gruber M, Dorfer H, Kwikiriza G, Meimberg H, Curto M.   +8 more
europepmc   +1 more source